| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0951 |
|---|
| Symbol | |
|---|
| ID | 8490937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 964775 |
|---|
| End bp | 965314 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 646358976 |
|---|
| Product | protein of unknown function DUF177 |
|---|
| Protein accession | YP_003238937 |
|---|
| Protein GI | 260892840 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000012525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTCACGG TTAACGTCGC GCAGCTCAAG AAAACACCGG CGGAGAGCCG CCGCTATGTG
CTCCGGGAGC GGCTGGGTTT CCTTCCGGGT GAAGGAGGAG AAGAACTGCT CCTCCTTTCT
CCAGCAGAGC TCGACCTGAC GCTGACCAAC GCCCGCAGCT ACCTCTGGGC TGTGGGCGAA
GTAATAGCCA CGGTGGAGCT CATCTGCAGC CGCTGCCTTA AAAAATTTCC CTTTCTTTTG
CGGGGCCGGT TTGAGGAGAA ATTCCGCCTG ACGACCGAAG CAGAAGAAGG GGAGGAAATG
CCTCCGGTGG AGGAGGAAAT AGATTTTACT CCTTACGTGC TGGAAAGCCT TTTGCTGGCC
CTTCCGATGA AGCCGCTTTG TCGGGAGGAT TGTGCCGGTC TTTGTCCCTG CTGCGGTCAG
GACTTGAATC AGGGTTCCTG CTCCTGCTCC CGGGTGCCTG CCGATCCCCG CTGGGCGGAG
CTGGCCAAGT TTCTGAACTC CCAAGAAGGA GGTGGCAAAG ATGGGGGTAC CAAAGAGTAG
|
|---|
| Protein sequence | MFTVNVAQLK KTPAESRRYV LRERLGFLPG EGGEELLLLS PAELDLTLTN ARSYLWAVGE
VIATVELICS RCLKKFPFLL RGRFEEKFRL TTEAEEGEEM PPVEEEIDFT PYVLESLLLA
LPMKPLCRED CAGLCPCCGQ DLNQGSCSCS RVPADPRWAE LAKFLNSQEG GGKDGGTKE
|
|---|
| |