| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0931 |
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| Symbol | |
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| ID | 8490917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 949361 |
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| End bp | 951091 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 646358956 |
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| Product | cobalamin biosynthesis protein CbiD |
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| Protein accession | YP_003238917 |
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| Protein GI | 260892820 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1903] Cobalamin biosynthesis protein CbiD |
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| TIGRFAM ID | [TIGR00312] cobalamin biosynthesis protein CbiD
[TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.738737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGAAGT CCCGGCGTCA CGGCTACACT ACCGGCGCCT GTGCGGCAGC GGCGGCCAAG
GCGGCAGCCC TCCTTCTCTT CCACGGCGTT TCGGTGCGGG AGGTAAAGAT AAAAACTCCC
CAAGGGAAGG AGCTCGTCCT TCCCGTAGCC TCGGCGGAGA AGGGAGAGGG ATGGGCGTGC
TGCGGAGTGG TGAAGGACGC GGGGGACGAT CCCGACGTCA CCCACGGACT TACCGTCTAC
GCCACCGTGG CTCCTGCTTC CGAGCTCCGG CTGGAAGGAG GGCCGGGGGT AGGAGTGGTG
ACGCGCCCCG GCCTGCCCGT GCCCCCAGGA GAGCCAGCCA TAAACCCGGG ACCGCGGCAG
ATGATCCTGG AGGCGGTGAG AGAAGTATTG CCTCCTGGGC AAGGGGCGGT CATCACCATA
AGCGTTCCGG GCGGGGAGGA GGTGGCGGCC CGTACCTTTA ATCCCCGGCT GGGTATAGTA
GGAGGAATTT CCATCCTGGG CACCACCGGG ATAGTGGTTC CTTTCTCCGA AGAGGCCTAC
CGGGAAAGCC TCAAGGCGGC GGTAAACGTG GCGGTGGCGG AGGGGTGGCG TATATTAGTC
CTGGTTCCGG GGCGCTCCGC TGAGAAGCTG GCCTTGAGTT ACGGCTTCCC GGCAGAGGCG
GTGGTGCCCA TGGCCAACTA CGTGGGTTTT CTCCTGCAGC ACTGCGCCGA AGTGGGAGTG
GAAGGAGTAA TCCTCTGGGG GCAGGCGGGG AAGCTTTTGA AAGTAGCGGG AGGGGTCTTC
AACACCCACA GCCGGGTGGC CGATGCCCGC CTGGAGGTGC TGGCGGCTCT GGCGGCAGCG
GAGGGAGCTT CGCCTTTCCT GGTAGGGCGG ATACTGGAGG CGGCCACGGT GGAAGAGGCG
GCGGAATGGC TGGCCAAAGA GAATCTGGAG CGTACGTGGC ACCGGGTGGC TGCCCGGGCA
GCCTTAAAAG CCTGGGAGTA TGCGGGGGGA AAGCTGCGGG TGGGGGCGGT CCTTTTCGAC
CGGGAAGGAA AGATCTTGGG CTGCAGTGAG GAGGCTTGTA CCCTGGCTTC TCAGCTGGGA
GTGAATCTTC CTTCTTCGTC CCCTTCTATT CCTCCCGGCA TTTACCTGGT GGGGGTGGGG
CCGGGCGACC CGGCCTATCT TACCCCGGCA GCCTGGCGGG TGATCCGCGG GTCCAGGCTG
GTGGTGGGGG CTCCCAAGGT TTTAAAGCGT CTAGGTCTTA CCGGCGAGCC CTTGCTTCCC
CCTTTTGCTC CCCTTTTCGC CTTACTCGAA AGAGAAAGCT CCACCTCCCC CGTGGCGGTG
CTGGTTTCGG GCGATCCGGG GCTCTTTAGC ATACTTCAGA CGCTCAGGCG CGAACTCTCT
CAACTCCCCC TCCGAGTGGT GCCGGGCATA AGCGCGGTTT CTACCCTTTT CGCCCGCCTG
GGTAGGGGCT ACGAGGAGGC CCGTTTTCTG AGCCTACACG GGCGGGGCAC GGAGGAGGAG
CTGCTGGCCG AGGTGAAAAA GGGGGGAACG GTGGTGGTCT TCACCGGTCC CGCTTTCCCT
CCCCAGCGAA TAGGGGAGGT GCTGGCGGCT GCCGGCTACG GTGGTTTGCC GGTGGCGGTG
GGAGCGGACC TCACGCTTGC GGAGGAAAAG CTTCTTGAGC AGGGAGAGGC CGGGCAGCTG
GCAAAGCTTG AGGGAGATTG GTCGAATGCG GTGGTGGTCA TCTTTGCCTG A
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| Protein sequence | MKKSRRHGYT TGACAAAAAK AAALLLFHGV SVREVKIKTP QGKELVLPVA SAEKGEGWAC
CGVVKDAGDD PDVTHGLTVY ATVAPASELR LEGGPGVGVV TRPGLPVPPG EPAINPGPRQ
MILEAVREVL PPGQGAVITI SVPGGEEVAA RTFNPRLGIV GGISILGTTG IVVPFSEEAY
RESLKAAVNV AVAEGWRILV LVPGRSAEKL ALSYGFPAEA VVPMANYVGF LLQHCAEVGV
EGVILWGQAG KLLKVAGGVF NTHSRVADAR LEVLAALAAA EGASPFLVGR ILEAATVEEA
AEWLAKENLE RTWHRVAARA ALKAWEYAGG KLRVGAVLFD REGKILGCSE EACTLASQLG
VNLPSSSPSI PPGIYLVGVG PGDPAYLTPA AWRVIRGSRL VVGAPKVLKR LGLTGEPLLP
PFAPLFALLE RESSTSPVAV LVSGDPGLFS ILQTLRRELS QLPLRVVPGI SAVSTLFARL
GRGYEEARFL SLHGRGTEEE LLAEVKKGGT VVVFTGPAFP PQRIGEVLAA AGYGGLPVAV
GADLTLAEEK LLEQGEAGQL AKLEGDWSNA VVVIFA
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