| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0887 |
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| Symbol | |
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| ID | 8490872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 900906 |
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| End bp | 902438 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646358913 |
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| Product | GMP synthase, large subunit |
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| Protein accession | YP_003238875 |
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| Protein GI | 260892778 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0519] GMP synthase, PP-ATPase domain/subunit |
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| TIGRFAM ID | [TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000175854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCGGGAC AGGAACTGGT CTTAATCTTA GACTTTGGCG GGCAGTATAC CCAGCTTATT
GCCCGGCGGG TGCGCGAATG CCACGTTTAC TGCGAGATTA TCCCCTACCA TACCTCTCTA
GGAGAAATTA AAGAACGTCG GCCGCAGGGG TTAATTCTTT CCGGCGGCCC GGCCAGCGTT
TATGAGGAGA CTGCTCCTAG CGTCCCCTTA GAGCTCTTTG AGATGGGTAT TCCAGTGCTG
GGAATATGCT ACGGCATGCA GCTCATGGCT CACCTGCTGG GGGGGGAGGT CAAGCCGGGA
ATCTACCGGG AGTACGGGCG GACCGAGCTT TATCTGACCT CTCCTTCTCC TCTGTGGGAA
GGGGTGGACA GTCCCACGCC AGTGTGGATG AGCCACGGCG ATCTGGTCAC CAGGGTTCCC
CAGGGTTTTG AAGTCACCGC TTCCACCAAG GACGTGTCGG TAGCCGCCAT GGAGGATCCT
TACCGGCGGC TTTACGGGGT TCAGTTCCAC CCGGAAGTGG CACATACGGC GGCAGGGAAG
CAGATAATCC GTAATTTCCT TTTTAAGGTC TGTAACTGCC AGGGAACCTG GACCATGTCC
TCTTTCATTG CCAGTGCTAT CGAAGAGATA AGGAGCCAGG TGGGGGAGGA GAGGGCCCTT
GCGGCTTTGA GCGGCGGGGT AGACTCCACC GTGGCCGCAG TTCTGGTTCA CCGGGCCATA
GGGAACCGAC TCACCTGTGT TTTCGTTAAC CACGGTCTCT TGCGCAAGGG AGAGGCGGAG
TCGGTCCGTG CTGCCGTGCA AGCTTTGGGC GTACCCCTGG TTTACGTGGA TGCTTCCGCC
CGGTTTCTGG CGCAGTTGGA AGGCGTAGTG GATCCGGAGG AGAAGCGCCG TCGGGTAGGG
CACGAGTTCA TCCGGGTTTT CGAGGAAGAG GCGCGCAAGC TCGGGAAGGT GCGCTTCCTG
GTGCAGGGGA CCCTATACCC GGACGTTATC GAGAGCGGCA CGGCTTTAAG CCACCGCATA
AAGTCGCACC ACAACGTAGG GGGCCTCCCG GAAGAGATGG AGCTGGAGCT CCTGGAGCCC
TTACGCTACC TCTTCAAGGA CGAGGTACGG GAACTGGGTA AAGAGTTAGG GTTGCCCGAG
GAAATTGTCT GGCGCCAGCC CTTCCCGGGT CCCGGGTTGG CGGTGCGGAT ACTGGGGGCG
GTCACGCCTG AGAAACTTTC TTTACTGCGC GAGGCCGACG CCATAGTTAC TGAGGAAATC
AAGAAGGCAG GGCTGGAAAA GGAGCTCTGG CAGTACTTTG CCATCCTCAC CGACACGCGC
ACGGTGGGGG TCATGGGGGA CAGGCGTACT TACGCCTACA CGGTAGCCGT GCGGGCGGTG
GAAAGCCAGG ATGGAATGAC GGCCGACTGG GCGCGTCTTC CCTACGACCT ACTGGAAAAA
ATCGCTTCCC GGATAGTCCG GGAGGTACCC GGGGTCAATC GGGTGGTTTA CGACATTACT
TCCAAGCCGC CTGCTACCAT AGAATGGGAA TAA
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| Protein sequence | MPGQELVLIL DFGGQYTQLI ARRVRECHVY CEIIPYHTSL GEIKERRPQG LILSGGPASV
YEETAPSVPL ELFEMGIPVL GICYGMQLMA HLLGGEVKPG IYREYGRTEL YLTSPSPLWE
GVDSPTPVWM SHGDLVTRVP QGFEVTASTK DVSVAAMEDP YRRLYGVQFH PEVAHTAAGK
QIIRNFLFKV CNCQGTWTMS SFIASAIEEI RSQVGEERAL AALSGGVDST VAAVLVHRAI
GNRLTCVFVN HGLLRKGEAE SVRAAVQALG VPLVYVDASA RFLAQLEGVV DPEEKRRRVG
HEFIRVFEEE ARKLGKVRFL VQGTLYPDVI ESGTALSHRI KSHHNVGGLP EEMELELLEP
LRYLFKDEVR ELGKELGLPE EIVWRQPFPG PGLAVRILGA VTPEKLSLLR EADAIVTEEI
KKAGLEKELW QYFAILTDTR TVGVMGDRRT YAYTVAVRAV ESQDGMTADW ARLPYDLLEK
IASRIVREVP GVNRVVYDIT SKPPATIEWE
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