Gene Adeg_0574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_0574 
Symbol 
ID8490550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand
Start bp598874 
End bp599788 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content60% 
IMG OID646358601 
Productintegrase family protein 
Protein accessionYP_003238572 
Protein GI260892475 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.63621e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAGCC TCATCGACCG CTTCATAATC CACCTGCAGA CGGAAAAAGG CGCCTCTTTG 
CGAACTTTAA CCGAGTACCA GAAAGATTTG CTGGAAGGGC TTTCTTTCTT TGCCCGGCTT
TTGGGGGTGG CAGAGGCGGA GCTCTCCCCC CAGTCCATAA CTCCTTCCCT TTTCCGCCGC
TTCTTGGGGT ATTTGCATGA GAGATCCCTT TCCCGCAATA CCATCGCCCG GAAGCTGGCT
GCCTGGCGCA GCTTCTTCCG CTTCCTCTGC CGGGAAGGAA TACTCAACGC CGACCCCTTG
AAGCTAGTAA GCGCCCCTAA GCGGGAGAAG CGCCTCCCCC GCGTGCTTTA TCCCCATGAG
GCCGAGGCCT TGGTGACGGC CCCCAAGGGG ACGGATCCCA AAGCTTGGCG GGACCGGGCC
TTGCTGGAGG TGCTTTACGG CGCCGGGCTG CGGGTAAGCG AGGTGGAGCA TTTAAACCTT
TCGGACGTGG ATCTGGAACG AGGGGAGCTG AGGGTGTGGG GCAAAGGAGG CAAGGAACGG
ATTGCTCTTT TGCACCCGCT GGCGGTGGCG GCTTTAAAAG ATTATCTGGA ACGGGGGCGA
CCTTTGCTCC TGAGCCGGCG CTCTCGAGGA GAGGAAGAGC CAGCTCTCTT TCTCAACCAC
CGGGGGGAGC GCCTCTCTGC CCGGGGGATA AGGCTGATCG TGACCTCCTA CGCGGCCAAG
ACGGGGGTCA AAGGGAAGGT GACCCCCCAC ACCTTCCGCC ACTCTTTCGC CACCCACCTC
CTAGACGGAG GGGCTGATCT CAGGACGGTG CAGGAGCTTC TAGGGCACAA GCGCTTGGCC
ACTACCCAGA TCTACACCCG GCTAAGCCTC GAGCGGATAA AGCATATCTA CGAAAAGACC
CATCCCCGGG CTTAA
 
Protein sequence
MYSLIDRFII HLQTEKGASL RTLTEYQKDL LEGLSFFARL LGVAEAELSP QSITPSLFRR 
FLGYLHERSL SRNTIARKLA AWRSFFRFLC REGILNADPL KLVSAPKREK RLPRVLYPHE
AEALVTAPKG TDPKAWRDRA LLEVLYGAGL RVSEVEHLNL SDVDLERGEL RVWGKGGKER
IALLHPLAVA ALKDYLERGR PLLLSRRSRG EEEPALFLNH RGERLSARGI RLIVTSYAAK
TGVKGKVTPH TFRHSFATHL LDGGADLRTV QELLGHKRLA TTQIYTRLSL ERIKHIYEKT
HPRA