| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0434 |
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| Symbol | |
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| ID | 8490405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 443816 |
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| End bp | 447235 |
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| Gene Length | 3420 bp |
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| Protein Length | 1139 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 646358461 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003238437 |
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| Protein GI | 260892340 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGACTTTG TGCACTTGCA CCTGCATACC GAATACAGCC TGCTCGACGG TGCTGCCCGG
ATAAAGGATG TGGTGAAGCG GGCTAAGGAG CTAGGGCAGA ACGCCTTGGC CATAACCGAT
CACGGGGTCA TGTACGGCGT GGTGGACTTT TACAAAGCCT GCCAGGAAGT GGGAATAAAG
CCCATCTTGG GGTGCGAAGT TTACGTGGCT CCGCGCGGCA TGACCGACCG GACACCCAAG
GTGGACGACA ATCCCTACCA CCTGGTCCTC TTGGCCGAGA ACGAAGAAGG TTACCGCAAC
CTCATAGAAC TAGTTTCGCG CGCATTCTTG GAGGGCTTTT ATTATAAGCC GCGGGTGGAC
AAGTACCTGC TGGCCCAGAA GGCCAAGGGC CTAATTGCGC TGTCGGCCTG CCTGGCCGGA
GAGGTAGCCG CGCACCTACT CGCTGGAGAC TTCAAGAAGG CAGAGGAGGC GGCAGGGGAG
TACCGGGACA TCTTTGGGAA GGACAACTTT TTCCTAGAGC TCCAGGACCA CGGACTGCCC
GAACAGAAGC CAGTTAACGA GGGACTGATA AAGCTGGCCT CCCGGCTCGA TATCCCCCTT
GTGGCCACTA ACGACGTCCA CTACGTGGAG AGGGCGGATG CCGAAGTACA AGATTTGCTC
CTTTGCATCC AGACCGGGAA GAGCGTGGGC GATCCCGACC GCCTGCGTTT TGGCTCAGAC
CAGTTCTACC TCAAATCGGC CTTAGAAATG GCCCGGCTCT TCCCCGATCA CCCCGACGCC
CTACGAGCTA CGGTGGAGAT AGCTTCCCGC TGCGAAGTGA AGCTTTCTTT CGGCGAGTAC
CACCTGCCCG AGTTTCCCGT ACCCGAAGGG CACACCCCGG CTTCCTACCT GCGGGAGCTC
TGCTACGCTG GGGCAAAGAA ACGTTACGGC GATCCTTTGC CCCCGGAAGT GGAGGAGAGG
CTGGCCTACG AGCTCCAGGT CATAGAGCGC ATGGGCTATC CCCCTTACTT TCTCATCGTC
TGGGACGTGA TTCACTTCGC CCGGCGCAAC GGTATCATGG TGGGGCCGGG CAGGGGGTCG
GCGGCAGGAA GCCTGGTGGC CTACTGCCTG GGCATAACCA ATATAGACCC TTTGAAGTAC
GGGTTGCTCT TCGAGCGCTT CCTCAATCCT GAACGGGTGT CCTTGCCCGA CATCGATACC
GACTTCTGCT TCGAGATGCG AGACAAGGTT CTGGAGTACG TGGTGCGGCG CTACGGCGCC
GATCGCGTGG CCCAGATAGC TACCTTCGCC CAGCTATCGG CCCGGGCGGC CATAAGGGAT
GCCGGCCGGG CGCTGGGAAT GTCCTACGCC GAGGTGGACC GCGTGGCCCG CCTGGTGCCG
GGAGAGCCGG GAATGACTGT TGCCCGCGCC CTGGAGGAAT CGCCGGAGCT CAAAGAGCTC
TACGAGAAGG AGGCCTCGGT AAAGAAGCTG CTGGATGTGG CAGCCAAGCT AGAGGGGATT
CCCCGCCACG CTTCTACCCA CGCCGCCGGG GTGGTGATAA CCCCTGAACC TTTGATCCGC
CTGGTTCCCC TGCACCGGAT GCCTGATGGC ACAGTAGCCA CGCAGTTTAC CAAAGAGGGA
GTAGAAGAGC TCGGGCTTTT GAAGATGGAC CTTTTGGGGC TGCGTACCCT CACCGTCATA
CGCGACACCC TGCGGCATGT CAACCGCCGG GGGGTAAAAC TTGATCTGGA GAAAATCCCC
TTGGACGACC CGGCCACCTT CGAGCTTCTG TGCCGGGGAG ACACTATCGG TGTTTTTCAG
TTGGAGTCGA GCGGCATGCG CGCTCTCTTG CGCTCTCTCC AGCCTTCCTG CTTCGAGGAT
TTGATTGCTC TGGTGGCCCT TTACCGCCCT GGTCCCCTGG GAAGTGGAAT GGTGGATGAC
TTCATTAAGC GCAAGCATGG TCTTCTACCG ATTGAGTATC CCCATCCCTG GCTGGAGCCC
ATACTGCGGG AGACTTACGG GGTCATCGTT TACCAGGAGC AGGTGATGCA GATAGCCAGC
CGGCTGGCGG GTTTCAGCCT GGGCGAGGCC GACCTTTTGC GCCGGGCCAT GGGGAAAAAG
AAGCCGGAGG AGTTGGCCGC TTTACGCTCG CGCTTCGTGA AAGGTAGCGT AGAGCGGGGG
GTGGACGAGC GGCTGGCGGA GGAAATTTTC GACCGCATGG AGTACTTCGC CGGCTACGGC
TTTAACAAGA GCCACTCGGC TGCCTACGCC CTGGTGGCCT ACCAGACTGC CTACCTCAAG
GCTAACTACC CAGTGGAGTA CATGGCGGCG CTTTTGACCT CGGTGCGCGA CCGGACGGAG
AAAGTTGCCC TCTATGTGGA AGAGTGCCGA CGGCTGGGGA TAAAGATCTT CCCCCCCGAC
ATCAACGAAA GCGAGCGCGA TTTCAGCCCC ACTCCTGACG GGGGCATAAG GTTCGGGCTG
GCGGCGGTAA AGAACGTGGG GGAGGGTGCG GTGGAAGCCA TCCTTCAAGC TCGGAGGGAG
GGCGGTCCTT TCCGGGATTT TGCCGACTTC TGTGCCCGGG TGGGTGGTAG GGCTCTGAAC
CGGAAGGTGC TGGAAAGTTT GGCCAAGGCG GGAGCTTTTG CCTCCCTGGG GCATACGCGG
AAAGAGATTT TGGAAAGCAT AGATGAGGGG CTGAAAATCG CCAACCGGGC CAAGGCTAAG
AAGCAGCAGG GTATTCAGAT ATGCCTTTTC CAAAATATGG AGGATTTTGG CGGAGGGTAC
CGGCTGAAGT TCAACCGGCC CAACGGGGAA GAATTCCCCC GCCGCGAACT TTTGCGCATG
GAAAAAGAAC TTCTGGGGCT TTACATAAGC GGGCACCCCT TGGCCGAGTA CCGCGATCTC
CTGCGCCTCT TGACCGACGT GCAGGTGGCC GACCTGGCGG AGATGGAGGA AGACGCGGAG
GTCAAGGTAG GCGGGATGAT CGTGGGGATG AAGCGCCTGC GCACGCGGCG GGGCGAGCCC
ATGGCCGCTG TTTACCTAGA GGACCTGACC GGGGTAGTGG AGGCGGTGCT CTTCCCCCGG
GTCTATCAGG AGTGCCGCGC CTGTCTCCGG CCAGAAACGG TGGTGCTGGT GCAGGGGAAA
AAAGGAGGAA GTGAAGGGGA GCGGCTACGC TTGGTGGTAG ATGAGATGCG CGTGCTCGAT
CCGGGAAGTG CGCAGTTGGT CCTGTACCTT CCTCACAAAG AGAGTAGCCT CTTGGGGGAA
CTGAAGGAGG TGCTGCGGCG TTACCGGGGT TCCTGCCCGG TCTATCTACG CCTGCCGGGA
GAAAGTGCTT TGCGGCGGGT TCCCCAGGAT TACTGGATCA ATATCCTTTC GCCGGCTTTA
GGTTGCCTGA TCTCTCTGGT AGGAGAAGGG AATATAAAAA TTTTGTGGAA TAAAAGGTAA
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| Protein sequence | MDFVHLHLHT EYSLLDGAAR IKDVVKRAKE LGQNALAITD HGVMYGVVDF YKACQEVGIK
PILGCEVYVA PRGMTDRTPK VDDNPYHLVL LAENEEGYRN LIELVSRAFL EGFYYKPRVD
KYLLAQKAKG LIALSACLAG EVAAHLLAGD FKKAEEAAGE YRDIFGKDNF FLELQDHGLP
EQKPVNEGLI KLASRLDIPL VATNDVHYVE RADAEVQDLL LCIQTGKSVG DPDRLRFGSD
QFYLKSALEM ARLFPDHPDA LRATVEIASR CEVKLSFGEY HLPEFPVPEG HTPASYLREL
CYAGAKKRYG DPLPPEVEER LAYELQVIER MGYPPYFLIV WDVIHFARRN GIMVGPGRGS
AAGSLVAYCL GITNIDPLKY GLLFERFLNP ERVSLPDIDT DFCFEMRDKV LEYVVRRYGA
DRVAQIATFA QLSARAAIRD AGRALGMSYA EVDRVARLVP GEPGMTVARA LEESPELKEL
YEKEASVKKL LDVAAKLEGI PRHASTHAAG VVITPEPLIR LVPLHRMPDG TVATQFTKEG
VEELGLLKMD LLGLRTLTVI RDTLRHVNRR GVKLDLEKIP LDDPATFELL CRGDTIGVFQ
LESSGMRALL RSLQPSCFED LIALVALYRP GPLGSGMVDD FIKRKHGLLP IEYPHPWLEP
ILRETYGVIV YQEQVMQIAS RLAGFSLGEA DLLRRAMGKK KPEELAALRS RFVKGSVERG
VDERLAEEIF DRMEYFAGYG FNKSHSAAYA LVAYQTAYLK ANYPVEYMAA LLTSVRDRTE
KVALYVEECR RLGIKIFPPD INESERDFSP TPDGGIRFGL AAVKNVGEGA VEAILQARRE
GGPFRDFADF CARVGGRALN RKVLESLAKA GAFASLGHTR KEILESIDEG LKIANRAKAK
KQQGIQICLF QNMEDFGGGY RLKFNRPNGE EFPRRELLRM EKELLGLYIS GHPLAEYRDL
LRLLTDVQVA DLAEMEEDAE VKVGGMIVGM KRLRTRRGEP MAAVYLEDLT GVVEAVLFPR
VYQECRACLR PETVVLVQGK KGGSEGERLR LVVDEMRVLD PGSAQLVLYL PHKESSLLGE
LKEVLRRYRG SCPVYLRLPG ESALRRVPQD YWINILSPAL GCLISLVGEG NIKILWNKR
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