| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0407 |
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| Symbol | |
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| ID | 8490373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 416402 |
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| End bp | 417049 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 646358429 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_003238410 |
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| Protein GI | 260892313 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02859] RNA polymerase sigma-H factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000161705 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAGCCTGC GTGGCCCAAA CCAGCAAGCA TGCCCTTGCT ACGAGGCAAT GCAAGACGAA
GAAGTGGTAG CCTACGCCCG CAAGGGGGAC GTTAGGGCGC AGGAGTACCT CATAAACAAG
TACAAAAACT TCGTGCGGGC GAAAGCGCGA GCCTATTTCC TGGTAGGTGC CGACCGGGAA
GACATCATCC AGGAAGGCAT GATCGGTCTT TACAAAGCGA TAAGAGATTT TCGGATGGAC
AAGCTTTCCT CCTTTAGGGC TTTTGCCGAA CTTTGTATCA CGCGGCAGAT CATAACGGCC
ATCAAAACTG CTACCCGCCA GAAACACATT CCTTTGAACT CCTATGTTTC CCTGAATAAG
CCCATTTACG ATGAGGATTC CGACCGGACC CTGCTCGATG TGGTCTCCGA AGCTAAGATC
ACCGACCCGG AGGAAGTTGT GATTAGCCGG GAGGAATTCG ACCACATCGA GGCCAAGATG
GGCGAAATTC TGAGCAAGCT GGAGTGGCAG GTACTGGTCT CGTACTTAGA AGGCAAGTCC
TACCAAGAGA TCGCCGAAGA TCTGAACCGG CACGTCAAGT CCATCGACAA TGCCCTACAG
CGGGTCAAGC GCAAGCTGGA GCGCTACCTG GAACGTAAAG GCCACTAA
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| Protein sequence | MSLRGPNQQA CPCYEAMQDE EVVAYARKGD VRAQEYLINK YKNFVRAKAR AYFLVGADRE
DIIQEGMIGL YKAIRDFRMD KLSSFRAFAE LCITRQIITA IKTATRQKHI PLNSYVSLNK
PIYDEDSDRT LLDVVSEAKI TDPEEVVISR EEFDHIEAKM GEILSKLEWQ VLVSYLEGKS
YQEIAEDLNR HVKSIDNALQ RVKRKLERYL ERKGH
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