Gene Adeg_0406 details

Gene Information

• Locus tag: Adeg_0406
• ID: 8490372
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ammonifex degensii KC4
• Kingdom: Bacteria
• Replicon accession: NC_013385
• Strand: +
• Start bp: 415803
• End bp: 416279
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 646358428
• Product: protein of unknown function DUF901
• Protein accession: YP_003238409
• Protein GI: 260892312
• COG category: [R] General function prediction only
• COG ID: [COG3688] Predicted RNA-binding protein containing a PIN domain

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000350703
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATTGACG GCTACAACCT CATATACGCC CTGGAGATGG AGAAGGAAAA GACCGATCTG 
GCACATGCTC GCGACTACCT GATTGAACTA CTGGAAGAAT ATGCCGCTCT TACGGGGAAA 
GAGCTGGTGG TGGTTTTCGA CGCTTACCGG GTAAAAGGCG GGCAAGGCTC GCAGGAGACA 
AGGCGCGGGG TGAAGGTGAT ATTCACCAAG GAAAAGGAGA CTGCCGATAC GGTGATAGAA 
CGGCTGGCGG GGGAGCTGGC CAACGAGTTT CTGGTGACCG TGGTGACCGG CGACTGGATG 
GAACAGAGAC TGGTGGTGGG AGCAGGTGCT CTACGGGTCA CTCCCAAGGA ATTTTGGAAG 
CAGCTAACCC AGGTCTTTTC CTCCCGGGTT CTTGCGCAAT CGCTTTCCTT CGAGCGACTG 
GGTAACCGTT TGCCTGAGTC CCTGCGCCAA AAACTTAGCG AATGGAAGCT CAAATAA 

 

Protein sequence

MIDGYNLIYA LEMEKEKTDL AHARDYLIEL LEEYAALTGK ELVVVFDAYR VKGGQGSQET 
RRGVKVIFTK EKETADTVIE RLAGELANEF LVTVVTGDWM EQRLVVGAGA LRVTPKEFWK 
QLTQVFSSRV LAQSLSFERL GNRLPESLRQ KLSEWKLK