Gene Adeg_0399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_0399 
Symbol 
ID8490365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand+ 
Start bp409312 
End bp409791 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content54% 
IMG OID646358421 
Producttranscriptional regulator, CarD family 
Protein accessionYP_003238402 
Protein GI260892305 
COG category[K] Transcription 
COG ID[COG1329] Transcriptional regulators, similar to M. xanthus CarD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00433509 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTCAAGG TCGGCGATAA GGTAGTATAC CCAATGCACG GGGCCGGGAT TATAGAGGCC 
ATCGAGGAGA AAGAAATTCT GGGGCAAAAG CGTGAGTACT ATGTCCTTCG CTTTCCTATA 
GGGAACAATA TGAAGGTGAT GGTTCCCATT GACAACTGCC AGGAGATAGG GCTGCGGCGA 
GTAATCGATA AGAGCGAAGT GCAGAACGTG CTCAAACTCC TCCGTTCCTC CTGTACTGCC 
ATGCCTGCCA ACTGGAACCA CCGCTACCGG GCCAACCTGG AGAAGATCAA AAGCGGCAAC 
ATCTACGCCG TGGCCGAAGT GGTGCGGAAC CTAGCGCGCC GGGAGCGCGA ACGCGGGCTT 
TCTTCGGGCG AGAAGCGCAT GCTGGAAAAC GCTAAGCAGA TTCTGATTAG CGAACTGGTG 
CTGGCAATGG AAATGAAAGA AGAAGAGGCG CGGCAACTGC TAGATCGTGC TTTTGCGTAA
 
Protein sequence
MFKVGDKVVY PMHGAGIIEA IEEKEILGQK REYYVLRFPI GNNMKVMVPI DNCQEIGLRR 
VIDKSEVQNV LKLLRSSCTA MPANWNHRYR ANLEKIKSGN IYAVAEVVRN LARRERERGL 
SSGEKRMLEN AKQILISELV LAMEMKEEEA RQLLDRAFA