| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0384 |
|---|
| Symbol | |
|---|
| ID | 8490350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 391841 |
|---|
| End bp | 393487 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 646358407 |
|---|
| Product | ferredoxin-dependent glutamate synthase |
|---|
| Protein accession | YP_003238388 |
|---|
| Protein GI | 260892291 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0069] Glutamate synthase domain 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCCAG ATGGAACCCT TACCCCCTCT TCACTAGGTT TAAAGGACCT GCGCTGGCTC
ATCTACTGGG ACAAGGACAA GTGTGCCTTG TGCGGGCGCT GCACCGCCGT TTGCCCTGTT
AAGGCTATAG AGCTCGGGGT GCACCGCCAG CGGGTCGTCT TTTCCCCTCT CCTGGACGCG
CCCGCCAAGG AAGCTTCCTC TGGCCTTTAT CGCGTGTACT ATGGGATAAG GCAAAGGACC
GAGCCTGCCC ATGCCTGCAT CGGTTGCGGC ATGTGCGCCC AGGTTTGCCC CAACGGGGCC
ATACTGCCTT ATCGCAACGA CGAAGAGGAT AAGTTGCGCT TCCACTTCAA CCAGGGAGGA
CAGCCCAGGC GGCGCGGCGG GCGGCGCAAC GACCCGGCAC CGGGGACTCT TGACCGGATC
AAGTTCGTCC GCATATCTAT GCTGACCGAT CCGGCCCTGG ATGCCCTTCG CCACGAGTTT
GAGCTGCGCA CCCTGCTGGG AAGAATTTTG CCGCCGGAGG AGGAGCTAAG GCTTTACCGG
GAAGAGGGGT GGACCCCACC GGTAAGGGAG ATTTACCCCT TGATGATAGG GGGAATGTCC
TTAGGCGCCC TCTCTCCCAC CATGTGGGAG GGGCTTATGA TGGGCGTAGC TTACTTGAAC
GAAGAACTCG GCCTGCCCGT CAGGATCTGT ACCGGTGAGG GGGGATGCCC GCCTCGCCTT
CTGCGCTCGC GCTTTATTAA GTACGTCATC CTACAGATCG CCAGCGGTTA TTTCGGCTGG
GATGAAATCG TGCGGGCCAT CCCGGAGATG AAAGAAGATC CCTGCGCTAT AGAGATCAAG
TACGGGCAGG GGGCCAAGCC TGGGGATGGA GGTCTCTTGC TGTGGCACAA AGTCAACGAA
CTCATCGCAG CCATCAGAGG GGTGCCGCCG CGGGTGAGCT TACCCAGCCC CCCTACCCAC
CAGACCCTTT ACTCCATCGA GGAGTCGGTG GCCAAGATGA TCCAGTCGCT GGCCATGGCG
TGGGGCTTCC GCGTGCCCGT CTACCCCAAG ATATCCGGGA CCTCTACCGC CTTGGCCGTG
CTCAACAACC TCACGCGCAA CCCCTATGCT GCGGCCCTGT GCATAGACGG GGAGGACGGG
GCTACCGGTG CCGCTTACGA GGTGTCGCTT AACCACATGG GACACCCCAT TGCCAGCAAT
ATCCGCGATT GCTACTTAAA CCTGGTCAAG CTGGGAAAAC AGAATGAGAT ACCGCTCATA
GCCGCCGGAG GAATAGGGAA GCATGGCAAC CTGGCCGCCA ATGCCGCCGC CCTCTTTATG
CTGGGAGCGA GCGCTGTGCA AATAGGGCGC TATATCCTGC AAGCAGCCGC AGGCTGCCTG
GGATCGGAAT CTGACCGATG CAACGTTTGC AACGTGGGCA TCTGCCCCAA AGGGATAACA
TCGCAAGACC CGCGCCTTTA CCGCCGCCTT GATCCGGAGA AGGTGGCGGA AAGGGTGGTC
GATGTTTTCC TGAGCTTCGA CATGGAACTC AAGAAGATCG TGGCCGCCTT GGGCCGCTCG
ACCTCGCTGC CCATAGGCAT GTCCGACGCT TTGGGCATCG ACGATTACCA CGCGGCCGAA
AGGCTGCAGA TAAAGTACGT GGTTTGA
|
|---|
| Protein sequence | MLPDGTLTPS SLGLKDLRWL IYWDKDKCAL CGRCTAVCPV KAIELGVHRQ RVVFSPLLDA
PAKEASSGLY RVYYGIRQRT EPAHACIGCG MCAQVCPNGA ILPYRNDEED KLRFHFNQGG
QPRRRGGRRN DPAPGTLDRI KFVRISMLTD PALDALRHEF ELRTLLGRIL PPEEELRLYR
EEGWTPPVRE IYPLMIGGMS LGALSPTMWE GLMMGVAYLN EELGLPVRIC TGEGGCPPRL
LRSRFIKYVI LQIASGYFGW DEIVRAIPEM KEDPCAIEIK YGQGAKPGDG GLLLWHKVNE
LIAAIRGVPP RVSLPSPPTH QTLYSIEESV AKMIQSLAMA WGFRVPVYPK ISGTSTALAV
LNNLTRNPYA AALCIDGEDG ATGAAYEVSL NHMGHPIASN IRDCYLNLVK LGKQNEIPLI
AAGGIGKHGN LAANAAALFM LGASAVQIGR YILQAAAGCL GSESDRCNVC NVGICPKGIT
SQDPRLYRRL DPEKVAERVV DVFLSFDMEL KKIVAALGRS TSLPIGMSDA LGIDDYHAAE
RLQIKYVV
|
|---|
| |