| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0193 |
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| Symbol | |
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| ID | 8490154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 187155 |
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| End bp | 188420 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 646358229 |
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| Product | diaminopimelate aminotransferase |
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| Protein accession | YP_003238215 |
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| Protein GI | 260892118 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000572443 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCGACC CGAATGTGTT GCAGGAAGTA GAGCGCCTGC GCGGCGAGAT GGTGGAGACC
CTGGTGGAGC TCATTAGGAT ACCCGCTTTA AGTCCGGATA ACGGGGGCGA GGGGGAGCTC
CGCAAGGCGG AGAAGCTGGA AGAAATCATC CGCCGCTGGC CCTTCGACCG GATAGAGCGC
TATGACGCCC CGGATCCCAG GGCTTTAAAC GGTATACGCC CCAACCTCCT GGCCTACTAC
TACGGCGAGA GAGGAAAAGA GAGCCCCCGT TTGTGGATCC TCACCCACCT GGATGTAGTT
CCCCCGGGCG ACCTGGAAAA GTGGACAGAA ACCTCTCCCT TTAACCCTTT GGTCAAGGAA
GGTAAAGTTT ACGGCCGGGG AAGCGAAGAT AACGGGCAGA GCCTGGTAGC CTCCCTTTAC
GCGGTGAAGG CGCTCATGAA CCTGGGTCTC AGGCCCAAGC GGACCTTCGT CTTAGCCTTC
GTCAGCGACG AGGAGACGGG TAACAGGTAC GGCATTGAGT GGCTCATAAA GAACCACCCG
GAGCTTTTCC ACCGGGAGGA TCTGGTCCTA GTGCCCGACG GGGGAGACCG GGAAGGAATT
TTCATCGAGA TCGCCGAGAA AAGCCTTCTC TGGCTGAAAA TCAGGGTAGA GGGAAAGCAG
GTGCACGGAA GCACCCCCCA CAAGGGGTTT AACGCCTTTC GGGTAGCCCT GGACTACGCC
TCCTCTCTCG ACCGGCTGCT TCATGAGAAG TATGCCGATA AAGACGAACT CTTCGAGCTC
CCGGTGAGTT CCTTCGAGCC CACCATGGGG AAAAGCTTGA GCGATGCCCC CAACATAATC
CCCGGCGAAG TGGAAATCGT CTTCGATTGC CGTGTACTTC CCCGCTACCG GCTGGACGAC
ATTCTGAGAG AGGCCGAGGA GCTGGCGAGG CAGATCGAAG CCAGGCACCG GAAGGAAATA
GGGGAAAAGG TTCTTCCCCG GATAAAGCTT GAGGTCTTGC AGCGGGTGGA GTCCCCTGCC
ACTTTAGCCG ACAGCCAGAT AGTAAAGCTC CTCCGCCGAG CCATAAAGGA ACTCAGGGGC
AAAGAGGCCA AGGTAGGAGG CATCGGGGGA GGAACCTTTG CCGCCTATTT CCGGAGGCTC
GGCATCCCGG CGGCGGTCTG GGGCACTTTT GATGAACTGG CCCATCAGCC CAACGAGTAC
GCCCGGATCG ACAACTTGGT GGAAGACGCC AAGGTCATGG CCTACCTGGG CCTTTCCGCA
GATTAG
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| Protein sequence | MIDPNVLQEV ERLRGEMVET LVELIRIPAL SPDNGGEGEL RKAEKLEEII RRWPFDRIER
YDAPDPRALN GIRPNLLAYY YGERGKESPR LWILTHLDVV PPGDLEKWTE TSPFNPLVKE
GKVYGRGSED NGQSLVASLY AVKALMNLGL RPKRTFVLAF VSDEETGNRY GIEWLIKNHP
ELFHREDLVL VPDGGDREGI FIEIAEKSLL WLKIRVEGKQ VHGSTPHKGF NAFRVALDYA
SSLDRLLHEK YADKDELFEL PVSSFEPTMG KSLSDAPNII PGEVEIVFDC RVLPRYRLDD
ILREAEELAR QIEARHRKEI GEKVLPRIKL EVLQRVESPA TLADSQIVKL LRRAIKELRG
KEAKVGGIGG GTFAAYFRRL GIPAAVWGTF DELAHQPNEY ARIDNLVEDA KVMAYLGLSA
D
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