| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0171 |
|---|
| Symbol | |
|---|
| ID | 8490132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 165677 |
|---|
| End bp | 167005 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 646358207 |
|---|
| Product | Uncharacterized protein family UPF0324 |
|---|
| Protein accession | YP_003238193 |
|---|
| Protein GI | 260892096 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2855] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00698] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAA TTGCCTGCAA GACAGCTACC AAGAAAAGCC CCTTCATCAC CAGTGAGGAT
TGGTGGTCAG TTTATCTGGG CATCTTTTTC CTGCTACTGG TATTTCTGGC CTTTGCAACG
CACTTTGCCA ACCCTGATAT CATTAAGAAC GCCATGCCGG TAGAGTGGCC CAAAAAAGAT
TTAGTAGGTC ATCTAATTAG CAACCTACCG GCATACATAC TGGTATACGC ATTGCTAACA
GTTCTTACCA CCATAGCAGC CAGAGCTATG GGAGAAAATG TACTACACTA TATAGCAGGA
TTTACCGTGC TGTTCCTGGG AGCCTTTCTG GTGCTGATCC TAGGCAGCCA GCAGACGTTG
AAGCACTACG GGCTGGAATA TCCCTTCTGG TCGCTGGTCC TAGGGCTTAT AATCGGTAAC
CTCCTTCCCT TACCCCGCTG GCTCCGCGCA GCTAGCGACC ACACCGAGTT TTACATCAAA
ACGGGTATCG TCCTTCTAGG AGCCGCTCTG CCCTTCACTA CTATTGTAAA GGGTGGCATA
TGGGGATTCC TAGAGGCGGC CCTCATAATC GCCACCGGGT TTACAACAGC CTTCCTCATC
TCTCGGAAGC TCGGCCTAGA GCGGGAATTT GCTGCAGTTC TGGGAGCCGG TTCTTCCATA
TGCGGCGTTT CGGCAGCCAT AGCCGTGGGT TGCGCCATCG GGGCCGACCA GAAAAAGGTG
GGGTACGTAG CTTCCCTGGT AGTGCTTTAT GCCCTAGGGC TCATCTTTCT TCTGCCTGCC
CTTTCCCGCC TGCTGGGGCT TAATGACGTG GTGGCCGGGG CCTGGATCGG CGGCTCGGAG
CTGGCCGACG CTGCTGGGCT GGCAGCAGCC GCCATGGTGT CGGAAAAGGC GGTGCAGGTC
TTCACCTTAG TAAAGCTCAA CCGTGACGTC ATGGTAGCCA TAGTGGCCTT CATCCTGGCC
ATCGTGGCCG TCACTCGCTG GGGAAACGGC CAGGGAGAAA CCGGACGCCC CGGCGTTGGC
GTCATCTGGG AGCGCTTCCC CAAGTTCGTC CTGGCCTTCC TGGTGGCCTC CCTCCTCTCC
ACCTACTGGG TCAGCACCTA CGGGACGGCT GTCAATGCCC ACGTGATAGG CAACCTCAAC
GTGCTGAGGA CCTGGCTTTT CACCCTGGCC TTCCTCTGCA TCGGGCTCAA CACCCGCTTC
AAGGACCTCA AGGTGGAAGG GATAAAGCCG GTAATCGCCT TTTCCACCGT GGTGCTGGTG
AACGTGGTCA TGGGCTTTAT TCTGAGCCAT CTCTTCTTCG GCGGGATAAT TGCCCAGCCC
ATAAAGTGA
|
|---|
| Protein sequence | MAEIACKTAT KKSPFITSED WWSVYLGIFF LLLVFLAFAT HFANPDIIKN AMPVEWPKKD
LVGHLISNLP AYILVYALLT VLTTIAARAM GENVLHYIAG FTVLFLGAFL VLILGSQQTL
KHYGLEYPFW SLVLGLIIGN LLPLPRWLRA ASDHTEFYIK TGIVLLGAAL PFTTIVKGGI
WGFLEAALII ATGFTTAFLI SRKLGLEREF AAVLGAGSSI CGVSAAIAVG CAIGADQKKV
GYVASLVVLY ALGLIFLLPA LSRLLGLNDV VAGAWIGGSE LADAAGLAAA AMVSEKAVQV
FTLVKLNRDV MVAIVAFILA IVAVTRWGNG QGETGRPGVG VIWERFPKFV LAFLVASLLS
TYWVSTYGTA VNAHVIGNLN VLRTWLFTLA FLCIGLNTRF KDLKVEGIKP VIAFSTVVLV
NVVMGFILSH LFFGGIIAQP IK
|
|---|
| |