| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0071 |
|---|
| Symbol | |
|---|
| ID | 8490031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 63505 |
|---|
| End bp | 64758 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 646358110 |
|---|
| Product | Glycine hydroxymethyltransferase |
|---|
| Protein accession | YP_003238097 |
|---|
| Protein GI | 260892000 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.30135 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGCAGGA TTTTGCAACC TTTGGAGGAA GTCGATCCGG AAGTTTTTCA GGCTATAGAA
GAAGAAAAGC GGCGGCAGGA AGAGAAGCTG GTACTCATCG CCTCCGAGAA CTTCGCCAGC
CGCGCCGTGA TGGCGGCCCA GGGTTCGGTC TTAACCAACA AATACGCCGA GGGCTACCCG
GGGAAGCGCT ATTACGGGGG CTGCGAGCTC GTGGACGTGG TGGAGGAGCT GGCCATAGAG
CGGGCCAAGG CACTTTTCGG GGCAGAACAC GCCAACGTTC AGCCGCATTC AGGAACACAA
GCCAACTTTG CCGTCTACTT CGCCTTGCTT AAGCCAGGCG ACGTCATCAT GGGCATGGAC
CTGGCCCACG GGGGCCATCT CACCCACGGT AGCCCGGTCA ATATGTCGGG TGTTTACTTC
CGCTTCGTCC CTTACGGGGT AAGACGAGAC ACCGGTACCA TCGACTACGA TGAAGTGGCG
GAGCTGGCCA GGCGCCACCG GCCCAAGCTC ATCATTACCG GAGCGAGTTC CTACCCCCGG
GAGATAGATT TTGCCCGCTT TGCCGCCATC GCTCGGGAGG TAGGGGCCAA GCTCATGGCG
GACATAGCCC ACATAGCGGG GCTGGTAGCG GCGGGGTTGC ACCAAAGCCC CGTTCCCTAC
GCCGACGTGG TCACCTCCAC CACCCACAAG ACACTCCGAG GCCCGCGCGG AGGGCTTATT
CTTTGCAAGA AGGAGTACGG ACCTTTGATC GACAAGGCGG TGTTCCCCGG CACGCAGGGC
GGCCCCTTGA TGCACGTCAT TGCCGCCAAG GCGGTGGCTT TTAAGGAAGC TTTGCAGCCG
GAATTCAAGG AGTACCAGCG ACGGGTGGTG GAAAACGCCA AAGCTTTAGC GGAAGCCCTT
AAGGAGTACG GGTTTGAACT GGTTTCCGGC GGCACAGATA ACCACATGGT GCTGGTCGAC
CTCCGCAATA AGGGGATCAC GGGGGCGGAG GCGGAAGCCA GGCTTTACGA GGTGGGGTTG
GTGGTTAACA AGAACGTGGT CCCCTTCGAC ACCCAGCCTC CCCGGATTAC CAGCGGTATC
CGGCTGGGGA CGCCGGCGGT GACCACCAGG GGCTTGGGGC CAGAGGAGAT GCGGGCAATA
GCCACCGCCA TCCACTACGC CCTGGACTAC CGCGGGGAAG CCCGGTACCA AGAGAAGGCC
CGTGCTATAG TGCGGGAGCT CTGCCGGTCC TACCCCCTTT ACCGGGAAGG GTAA
|
|---|
| Protein sequence | MRRILQPLEE VDPEVFQAIE EEKRRQEEKL VLIASENFAS RAVMAAQGSV LTNKYAEGYP
GKRYYGGCEL VDVVEELAIE RAKALFGAEH ANVQPHSGTQ ANFAVYFALL KPGDVIMGMD
LAHGGHLTHG SPVNMSGVYF RFVPYGVRRD TGTIDYDEVA ELARRHRPKL IITGASSYPR
EIDFARFAAI AREVGAKLMA DIAHIAGLVA AGLHQSPVPY ADVVTSTTHK TLRGPRGGLI
LCKKEYGPLI DKAVFPGTQG GPLMHVIAAK AVAFKEALQP EFKEYQRRVV ENAKALAEAL
KEYGFELVSG GTDNHMVLVD LRNKGITGAE AEARLYEVGL VVNKNVVPFD TQPPRITSGI
RLGTPAVTTR GLGPEEMRAI ATAIHYALDY RGEARYQEKA RAIVRELCRS YPLYREG
|
|---|
| |