| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0058 |
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| Symbol | |
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| ID | 8490018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 52081 |
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| End bp | 53457 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 646358097 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_003238084 |
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| Protein GI | 260891987 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00215813 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTCAGG TGACCCCGGC TAACGATTTG GAAAGCAAGA CCGTGCTGGA GCTGAGATCC
ATAGCCAAAG AACTGGGAGT TAAGGACTAC TACCGTTTGC GCAAGCAGGA ACTAGTCGAG
GCTATAAGGG CCCGGTACGC AGCGGAAAAG GAAGAGGTTA AAGAGCCTGA AGTGGCGGTT
GAAATCAAGG CACCCGAGCC AGAGAAAGAG CCGGAGCCAT CTGCCCTCCC GCGTGCCCGG
GGCGTGCTGG AGATCCTGCC GGACGGCTAC GGTTTTTTGC GCCCGCATAA ATACCTGCCC
TCTCCCGACG ACATCTACGT TTCTGCCTCC CAGATCCGGA AGTTCGACCT GCGCACGGGC
GATCTGGTTG AGGGAGTGGT ACGCCGGCCT AAGGAGAACG AAAAGTACTT TGCTTTATTA
CGGGTGGAGC GGGTGAATGG ACAGCCTGCC GACGAACTTC CCTCTCGTCC CCACTTCGAC
AACCTCACCC CGCTTTACCC CTGCGAGCGC ATCCGTCTGG AGACCACTCC CGACCGCATA
GCGCCGCGCA TCATCGATCT CATAGCCCCT CTAGGCAAGG GGCAGCGGGG CTTGATCGTG
GCTCCTCCCA AGGCGGGTAA GACCACGCTC CTGAAGGAGA TAGCCAACAG CATAACAGCC
AACCACCCGG AGATTTACCT CATCATCCTG CTCATCGACG AGCGCCCGGA GGAGGTAACC
GACATAAGCC GCTCGGTCAA GGCAGAGGTG GTGAGCTCCA CTTTCGATGA GCCGCCGGAG
AACCACGTGA AGGTGGCGGA GATGGTGCTG GAGCGGGCCA AGCGTCTGGT GGAGCACGGG
CGTGACGTGG CTATACTGCT TGACAGCATC ACCCGCCTGG CGAGGGCCCA CAACCTGGTA
ATCCCTCCCA GCGGCCGTAC TCTTTCCGGC GGTGTGGACC CGGCGGCTTT ACACAAGCCC
AAGCGCTTCT TCGGCGCGGC CCGCAAGCTA GAGGAAGGTG GGAGCCTCAC CATCCTGGCA
ACGGCCCTTA TCGAAACGGG GAGCCGTATG GACGAGGTGA TTTTCGAGGA GTTCAAGGGC
ACTGGGAACA TGGAGCTGGT GCTGTCGAGA TCCTTGGCCG AGCGCCGGAT CTTCCCCGCC
ATCGACGTCA AGCGCTCCGG CACCCGCAAG GAGGAGCTGC TGTTGAGCCG AGAGGAGCTG
GAGCTGGTCT GGTACTTCCG GCGGGCCACT AACGAGATGA CCCCCTGGGA GGCTATGGAG
CACCTGCTGG AGGAGATTCG CCGCACCCGC TCGAACGAGG AGTTGGTGCG CAACTTCCAG
GCCTTCAAGC AGGCCAGCGG TGAAGAGGTT CTGGGCCTTT CCCCCCACTA CCGGTAG
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| Protein sequence | MSQVTPANDL ESKTVLELRS IAKELGVKDY YRLRKQELVE AIRARYAAEK EEVKEPEVAV
EIKAPEPEKE PEPSALPRAR GVLEILPDGY GFLRPHKYLP SPDDIYVSAS QIRKFDLRTG
DLVEGVVRRP KENEKYFALL RVERVNGQPA DELPSRPHFD NLTPLYPCER IRLETTPDRI
APRIIDLIAP LGKGQRGLIV APPKAGKTTL LKEIANSITA NHPEIYLIIL LIDERPEEVT
DISRSVKAEV VSSTFDEPPE NHVKVAEMVL ERAKRLVEHG RDVAILLDSI TRLARAHNLV
IPPSGRTLSG GVDPAALHKP KRFFGAARKL EEGGSLTILA TALIETGSRM DEVIFEEFKG
TGNMELVLSR SLAERRIFPA IDVKRSGTRK EELLLSREEL ELVWYFRRAT NEMTPWEAME
HLLEEIRRTR SNEELVRNFQ AFKQASGEEV LGLSPHYR
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