Gene Adeg_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_0052 
Symbol 
ID8490012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand
Start bp47808 
End bp48698 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content62% 
IMG OID646358091 
Productsignal peptide peptidase SppA, 36K type 
Protein accessionYP_003238078 
Protein GI260891981 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID[TIGR00706] signal peptide peptidase SppA, 36K type 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCACAGGC GAATTTTAGG CGGGACTATC TTAGCGGTGA TCTTTCTCTC CCTGGTCCTG 
GCAGCCGTCT GGGGGCGTAG CCGGGAAAGA GGAGTAGGCT TAGGGGAAGG AAAGATAGGG
CTTATCTACC TCACCGGCGT TATAGCCGGG GAAGGAGGGG CTTCCCCCCT CTTCGGCAGC
ACGGCCGACG TGCGGGGGGT GATCGAGGCT CTGGGCCGAG CTGAAGAGGA CCCCTCCATC
AAGGCGGTGG TGCTGCGCAT TGACAGCCCG GGAGGGAGTG CGGCGGCCAG CCAGGAGATA
AGTGACGCCG TGCGCCGGGT GCAGAAGGCG GGGAAGAAAG TGGTGGTTTC CATGGGGGAT
ACCGCTGCCT CGGGGGCCTA CTGGGTGGCG GCGGGGGCGG ATAAGATCGT GGCCCTTCCC
TCCACCATTA CCGGCAGCAT CGGGGTCATA TTCGAAACCG CCAATCTTTC CGGCCTTTAC
CACAAGTTGG GGATACAGAA GGAAATCCTG AAGAGCGGGC CCTTTAAAGA TATGGGTAGT
GAAAGCCGCC CCTTGACGCC GGAGGAACGG GCCATCCTGC AGGGCATGGT GGACGACATC
TACCAGCAGT TCGTGGACCA CGTGGCTCAG GGGAGGCATC TTCCCCGGCA GAAGGTCTTG
GAGCTGGCCG ACGGCCGGGT CTTCACCGGC AGGCAGGCCA AAGAGCTGGG CCTGGTGGAT
GAACTAGGCG ATCTCCACAC GGCGGTGCAG GAGGCGGCTC ATCTGGCAGG AATAAAGGGG
AAGCCAGAGG TGGTGGAACT CGGCAAAGCG GCCTGGTTCC GGCGCTTCTT CGGCGGTTTC
TTAGACAGCC TGCTGCTTCC CCGCTTTCAG GAAGGGGGTT TAAAGTCTTG A
 
Protein sequence
MHRRILGGTI LAVIFLSLVL AAVWGRSRER GVGLGEGKIG LIYLTGVIAG EGGASPLFGS 
TADVRGVIEA LGRAEEDPSI KAVVLRIDSP GGSAAASQEI SDAVRRVQKA GKKVVVSMGD
TAASGAYWVA AGADKIVALP STITGSIGVI FETANLSGLY HKLGIQKEIL KSGPFKDMGS
ESRPLTPEER AILQGMVDDI YQQFVDHVAQ GRHLPRQKVL ELADGRVFTG RQAKELGLVD
ELGDLHTAVQ EAAHLAGIKG KPEVVELGKA AWFRRFFGGF LDSLLLPRFQ EGGLKS