| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0045 |
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| Symbol | |
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| ID | 8490005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 39324 |
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| End bp | 40436 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 646358084 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003238071 |
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| Protein GI | 260891974 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00077566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGGCGCT GGCGATTAAC TGCCCTGGGG ACCCTGCTCC TGTTCGTCGC CTCTCTTTTC
GCGCCCTTTC CGTCCTGGGC TGACGAGAGT CCCCGGATGA CCTTGAGCCT GGCCCAGGCG
GTACAGCTCG CCTGGCAGAA CTCCCCCGAC GTCCGCGCCG CCCAGGCCGA AGTGGATAAG
GCTTGGGAGC AGCGCAAGGA CGCGGCCGAC GTAGTAGAGA AAATGAGCTA CATTCCTGCC
ACCGGCCCTA ACGTGGTGCC ATACGCCGAT CAGGCCTGGG TAGGCCTTCT GATGGCCGAT
GCCAACTGGC AGATAGCCAA GAAAGACCTG GAAGACAAAA AGCAGTACCT GGCCATGCAG
GTGGCGCAGG CTTACTACGA TGTGCTGGCG GCTCAGGCAG AGTATGATAG GCAGCAACAG
CAGTTGCGCT TGGCCGAGCA GGACCTCACC GTAGCCCGGG CTGGGTACTG GGCCGGCACC
GCCACCCTTT TCGACCTCAG CCCCAAGGAG GCCCAGGTGG AAGGGAGCCG CAAAGCCGTA
GCGGCAGCCA AGGAAGCACT GGACAAAGCC TACGTTGTCT TAAATCGCCT GGTGGGTCTC
CCTTCCGATG CCCGTCCCGT CTTGACCGAC CAGCCGCCGC GTGAGAACCT GGTGGTCTAT
AGCTTGGATG CCGAAGTGGC CCGAGCGATA GACTCTTCTG CCGCCCTTTT CAAGGCTAAA
AAGGCAGTGG ACATAGCCCG CTGGCAAGTG GACTACCCCT ATGCCACAGG CAAGTACCTC
AAGTACAACA TCGCCACCGC TGATCTGACG GTAAGCGAGC AGAACCTCCA GTCGGCCCAG
GACCAGCTGA AAGAGAGGGT GCTCACCACT TACCGGGATA TCCGAGCTCT GGAGGAGCAA
ATCCAGAGGA TGGAGGCGCA GGTGAAGGCG GCAGAGGATC AGGTGAAGAA GGCTAGGCTC
TTCTACGAAG TGGGTATGGC CACCAAGCTG GATCTAGAAA AGGCCGAGAC TGCCTTGGTC
GACGCCCGCG CTCAACTCGA AAACCTCTAC TGCCAGCACG CCAGTGCCCT GGCCGGGTGG
AACTACCTCA CCGGCCGCCC GGTAGTGAGT TAG
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| Protein sequence | MRRWRLTALG TLLLFVASLF APFPSWADES PRMTLSLAQA VQLAWQNSPD VRAAQAEVDK
AWEQRKDAAD VVEKMSYIPA TGPNVVPYAD QAWVGLLMAD ANWQIAKKDL EDKKQYLAMQ
VAQAYYDVLA AQAEYDRQQQ QLRLAEQDLT VARAGYWAGT ATLFDLSPKE AQVEGSRKAV
AAAKEALDKA YVVLNRLVGL PSDARPVLTD QPPRENLVVY SLDAEVARAI DSSAALFKAK
KAVDIARWQV DYPYATGKYL KYNIATADLT VSEQNLQSAQ DQLKERVLTT YRDIRALEEQ
IQRMEAQVKA AEDQVKKARL FYEVGMATKL DLEKAETALV DARAQLENLY CQHASALAGW
NYLTGRPVVS
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