Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_0038 |
Symbol | |
ID | 8489998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | + |
Start bp | 32217 |
End bp | 32897 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 646358078 |
Product | Deoxyribonuclease V |
Protein accession | YP_003238065 |
Protein GI | 260891968 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCCTA AAAAAGAGTG CCCCTGGAAC CTCACACCGC AGGAAGCAGT AGAGCTTCAG GAGGAGTGGC GGAGGGAAGT GAAAGTGGAA GACGGCCCCC GCCCGGAGGA CTTGCGGCTG GTCGCGGGGT GCGACGTATC CTTCTCCCAA GCCCGAGGCA TGCTCTACGC CGCGGTGGTG GTGCTGAAAG TACCCGATTT TGAGGTGGCG GAGGAAAGCA CTGCCTGCCT TCCCGCCACC TTTCCTTACA TTCCCGGCCT TTTGGCTTTC CGTGAGATAC CGGCTCTTCT CTCTGCCCTG GAGAAAATAA AGAGCACTCC CGACCTCATC CTGTGTGACG GGCAGGGGAT CGCCCATCCC CGGGGAATGG GAATCGCCAG CCATCTGGGA GTGCTTTTCG ACCTGCCGAC CATAGGCGTG GCCAAAACCT GCCTGGTGGG GAGGTGGAAA ACGCCAGGTC CCGAGCGGGG AAGCTTTTCC TACCTCCGCT ACCGGGGCCG GGTGGTAGGG ACGGTCCTGC GTACCCGCAC GGGTGTGAAG CCTGTCTTCG TCTCTCCCGG GCACCGGGTG AGCGTGGATC TGGCTCGCGA GATCGCCCTC TACCTCGCCC CCCGCTACCG CCTCCCCGAA CCCTTGCGCC TGGCCCACCT CCTAAGCTAC CGTCTCAACC GTCAGGGCTA G
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Protein sequence | MRPKKECPWN LTPQEAVELQ EEWRREVKVE DGPRPEDLRL VAGCDVSFSQ ARGMLYAAVV VLKVPDFEVA EESTACLPAT FPYIPGLLAF REIPALLSAL EKIKSTPDLI LCDGQGIAHP RGMGIASHLG VLFDLPTIGV AKTCLVGRWK TPGPERGSFS YLRYRGRVVG TVLRTRTGVK PVFVSPGHRV SVDLAREIAL YLAPRYRLPE PLRLAHLLSY RLNRQG
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