| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0010 |
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| Symbol | |
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| ID | 8489968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 11280 |
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| End bp | 12863 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 646358048 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_003238037 |
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| Protein GI | 260891940 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit
[TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.155189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCGGG TGCTGGTAAC CGACGGCGTA TCTCCCGAAG GGCTAAAAGC TTTAACGGAA
GCGCCGGATG TGGAAGTAGA TTTTCGCCCC ACTCTCAATG AGGAAGAACT CAAGGAGATC
ATTGGGGAAT ACGACGCCTT GATCGTGCGC AGTGCCACCA AAGTGACGGC GGCGGTGCTG
GAGAAGGCTA GGCGGCTTAA GATCATAGGC CGGGCTGGCG TGGGAGTGGA CAACATCGAT
GTCAAGGCAG CTACGGCCAA AGGGATCATT GTGGCCAACG CCCCCGGCGG GAACACCGTG
GCGGCAGCCG AGCACACCAT CGGGCTTATG CTAAGCCTGG CCCGCAATAT ACCCGAAGCT
TGCGCCCGCA CCAAGTCGGG AGTTTGGGAT CGCAAGTCCT TTATGGGGGT GGAATTGCGG
GGCAAGGTTC TAGGAATAAT TGGTCTGGGC CGCATAGGTT CGGAGGTGGC CAAGCGGGCG
CAGGCCATGG AGATGAAGAT CATCGCCTAC GATCCCTACA TCCCCGAGGA GCGGGCACGG
GACCTGCGGG TGAAGCTCGT GCCCTTGGAC ACCCTGCTCC AAGAAGCGGA CTTCATCACC
ATCCACATTC CTCTCAGCAA GGAGACTTAT CATTTGATCG ACCGCGAGGC CTTTGTCAAG
ATGAAGCCCG GCGTGCGCCT TATTAACTGC GCCCGGGGTG GGATCGTGGA CGAGGAGGCC
CTTTACGAGG CTTTGAAGGA AGGTAAAGTG GCCGGTGCGG CGCTCGACGT CTTCGAGAAG
GAGCCCGTCA CCTCACACCC CCTCTTCTCC CTGCCCAACG TAGTGGTGAC CCCTCACCTG
GGTGCTTCCA CGGTGGAGGC CCAGCTGGCG GTGGCCGAGG TCATCGCCCA AGAGGTGCTC
ACCGCCCTGC GCGGGGGTTT TGTGCGCCAC GCCGTCAACC TTCCCTATCT GCGGCCGGAG
GTTCTCCCCG TCGTCGGCCC CTTCCTCCCG CTGGCGGAGA AGCTGGGTCT TTTTGCTGCC
CAGTTGGTGA GCGGCCGGAT AAACCAGGTG GAGGTCAACT ACTCGGGAGA GATCGCCCGC
TACGACACCA GCCTGCTCAA CACCGCGGTA CTCAAAGGGG TGCTGAGCGT GGCTTTGCAG
GACACCATAA ACTACGTCAA TGCCCCAGAG GTGGCCAAGC AGCGAGGCAT TAAGGTGAAG
GAGACCAAGC AGGAGCGGGA AGAAGAGTAC GTCAATCTCA TAAGTGTCAA AGTGGAGGCT
CCGGAGGGGG AGCACACCGT GGCCGGCACC CTGGTGCGGG GCAAGGAGCC GCGGGTGGTG
GAGATAGATG GGTACCGCGT GGACGCTGTG CCCGAGGGGT ACGTCCTCTT TATCCCGCAC
CTCGACCGGC CCCGCATCAT AGGGCGCATA GGAACCCTCA TCGGGGCCCA CGACATCAAC
ATCGCCGCCA TGCAGGTGGG GCGTAAGGAA ATAGGGGGCA AGGCCATTAT GCTCCTCTCG
GTGGATAGCC CGGTGCCGGA GGAGACCTTG CGTGAGATCG CCAAGGTGGA GAACGTGCTG
GACGTGAAGA TGCTCTACCT TTAA
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| Protein sequence | MYRVLVTDGV SPEGLKALTE APDVEVDFRP TLNEEELKEI IGEYDALIVR SATKVTAAVL
EKARRLKIIG RAGVGVDNID VKAATAKGII VANAPGGNTV AAAEHTIGLM LSLARNIPEA
CARTKSGVWD RKSFMGVELR GKVLGIIGLG RIGSEVAKRA QAMEMKIIAY DPYIPEERAR
DLRVKLVPLD TLLQEADFIT IHIPLSKETY HLIDREAFVK MKPGVRLINC ARGGIVDEEA
LYEALKEGKV AGAALDVFEK EPVTSHPLFS LPNVVVTPHL GASTVEAQLA VAEVIAQEVL
TALRGGFVRH AVNLPYLRPE VLPVVGPFLP LAEKLGLFAA QLVSGRINQV EVNYSGEIAR
YDTSLLNTAV LKGVLSVALQ DTINYVNAPE VAKQRGIKVK ETKQEREEEY VNLISVKVEA
PEGEHTVAGT LVRGKEPRVV EIDGYRVDAV PEGYVLFIPH LDRPRIIGRI GTLIGAHDIN
IAAMQVGRKE IGGKAIMLLS VDSPVPEETL REIAKVENVL DVKMLYL
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