| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0009 |
|---|
| Symbol | |
|---|
| ID | 8489967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 10128 |
|---|
| End bp | 11279 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 646358047 |
|---|
| Product | aminotransferase class V |
|---|
| Protein accession | YP_003238036 |
|---|
| Protein GI | 260891939 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG AAACGCGCCT TTTTATTCCC GGCCCCACAC CGGTGCCGCC GGCGGTGGCC
GAGGCCATGG CCCGGCCCCT CATCGGGCAT CGCACAGAAG ATTTCGCCCG CCTCTACGCC
CGTCTGGAGG AAAGGTTGCG GGTAGTCCTG GGGACCAAAA ACGATATCGT CATTCTCACC
TCTTCGGGTA CCGGGGGGAT GGAGGCAGCG GTGGCCAACC TAGTATCCCC CGGCGATCCC
GTCCTGGCCC TGGTCACCGG TAAGTTCGGC GAGCGCTTCG CCGAGTTGGC TAAAGTTTAC
GGCGGAGCCG TGGAAGTGAT GGAGTTCGGC TGGGGCAAGG CCGTAGACTT GGAAGCGGTG
GAGGAGAAGC TTAAAGCGCG GCGCTTCAAA GTCGTCCTGG CTACCCATAA CGAGACTTCT
ACCACCGTGG TCAACGACAT CCGGGGCCTG GGGGAACTCA CCCGGCGCTA CGGCGCTTTA
CTGGTGGTTG ACGCCGTATC GAGCGCCGGC GGCATGGAGA TACGCATGGA TGATTGGGGA
GTGGACGTAC TGGTCACTGC CTCCCAGAAG GCCCTGATGG TGCCCCCGGG CCTGGCCATC
GTGGCGGCAA GTGACGCAGC CTGGAAGGCG ATGGAGGAGA ACAAGAACCC TCGCTATTAT
CTTGACCTTC TGGCAGCCCG CAAGTCCAAG CAGAAGTACA ACACTCCTTA TACCCCTGCC
GTCTCCCTCT TTGTGGGGCT AGACCGGGCG CTTGATCTCA TCTTGGCTGA AGGCTTGGAG
AAGGTTTACC GGAAGCATCG GCTTTTGGCA CGGGCGGTGA GGGCGGCAAT AAGGGCTTTG
GGGCTTAAAC TCATGATACC TGACGAGTAT GCCTCCCCGG TGGTTACCGG CGTATGGGCG
CCGGAGGGCA TAGAGGTAGA CCGGTTGCGC AAGGAGATCG CCTCTCGCTA CGGAGTGCTG
CTAGCGGGGG GGCAGGGTCC GCTCAAGGGC AAGATCTTCC GTATATCCCA CATGGGCTAC
GTGGATGCGG TGGACATCTT GGGGGCCTTG GGTGCACTGG AGCTGGGGCT TTACCGCTTC
GGGTTTAAGT TTAAGCTGGG AGAGGGACTG GCCCAGGCCC AGGCCGTTTT GGCGGAGGAG
GGAGAGGAGT AA
|
|---|
| Protein sequence | MKKETRLFIP GPTPVPPAVA EAMARPLIGH RTEDFARLYA RLEERLRVVL GTKNDIVILT
SSGTGGMEAA VANLVSPGDP VLALVTGKFG ERFAELAKVY GGAVEVMEFG WGKAVDLEAV
EEKLKARRFK VVLATHNETS TTVVNDIRGL GELTRRYGAL LVVDAVSSAG GMEIRMDDWG
VDVLVTASQK ALMVPPGLAI VAASDAAWKA MEENKNPRYY LDLLAARKSK QKYNTPYTPA
VSLFVGLDRA LDLILAEGLE KVYRKHRLLA RAVRAAIRAL GLKLMIPDEY ASPVVTGVWA
PEGIEVDRLR KEIASRYGVL LAGGQGPLKG KIFRISHMGY VDAVDILGAL GALELGLYRF
GFKFKLGEGL AQAQAVLAEE GEE
|
|---|
| |