Gene Adeg_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_0003 
Symbol 
ID8489961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand
Start bp2800 
End bp3876 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content57% 
IMG OID646358041 
ProductDNA replication and repair protein RecF 
Protein accessionYP_003238030 
Protein GI260891933 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGGATAA GGTCGCTTTT TCTACGCAAC TTCCGCAACT ACTGCGAGCT TGAGTGGGAG 
CCCTCCAGTG GGATAAACTT ACTAAAGGGG CCCAACGCTG CGGGAAAAAC CAACCTGCTG
GAGGCTCTTT ATTTTGTTTT GTGCGGTCGC TCCTTCCGCA CCCTGCGGGA AGAAGAGATC
GTCCGGACGG GGGAAACGAC GACACTCATC AAAGGGAAGA TAGCAACTGC CTGGGGAGAA
ATAGAGACCG AAGTGAGATT TAAAAAGGGA ACCAAGCTTC TCTTCTACCA GGGGAAGCCT
GCTTCCCGCC GCGACTTTCC CGGGGAAAAG GTGGTATTAC TCTTCCGTCC CGAGGATCTC
TTGGTGGTTA CGGGAACGCC GGCGGAGAGG AGAGGGTTCT TCAACCGGGT TTTGGCCAAG
CTCGTGCCGG GTTACGAAGA GGTGCTTACC CGCTACCAGC GGGCGCTGGA GCAGCGCAAT
GCCCTTTTGC GCCTGCCAGA GAAGAAAGGG GAAGAGCTGG AGATATGGAC CGAAGCTTTA
GTTTCCGCGG GTGCTCTACT TTACCGGCTG CGGGTCGAGG GCCTGGGGTT GATAGGACCG
CTTACTTCCT CCCTTTATCG GGAACTGGTG GGAAAGAAGC TAGTGCTTCG CTACGCGACC
AACGCCGTCT CTCCTGCCAA GGAGAAGCCT TTGGCGGAGC AGTTTGCGGA AGCACTTTCT
GCTTTGGCCG AGAAGGAGAA GGTTTTGGGA CAGACCCTGG TGGGCCCGCA CCGCGACGAC
TTCCTTTTTA TAGTGGAGGG AGAAGACCTG CGCTACAAGG GCTCGCGCGG GGAGGTAAGG
GCAGCGGTGT TGGCCTTGAA GCTGGCGGAA GCCAAGCTTT TAGAGAAGAT GACCGGAGAG
AGGACGATCT TCTTCTTAGA CGACGTGTTC TCCGAGTTCG ACCCTCAGCG CCGCCGAGCC
TTGGCCCTTT ATCTGGAAGA ACGCCAGTCG TTTGTCACTT CGGCCGAGCC GGAGCTCAAG
CTGCCCGGTC GGACCTTCCT CATAGAGCAG GGAAGACTCC GAGCCGCCGA TTACTAG
 
Protein sequence
MWIRSLFLRN FRNYCELEWE PSSGINLLKG PNAAGKTNLL EALYFVLCGR SFRTLREEEI 
VRTGETTTLI KGKIATAWGE IETEVRFKKG TKLLFYQGKP ASRRDFPGEK VVLLFRPEDL
LVVTGTPAER RGFFNRVLAK LVPGYEEVLT RYQRALEQRN ALLRLPEKKG EELEIWTEAL
VSAGALLYRL RVEGLGLIGP LTSSLYRELV GKKLVLRYAT NAVSPAKEKP LAEQFAEALS
ALAEKEKVLG QTLVGPHRDD FLFIVEGEDL RYKGSRGEVR AAVLALKLAE AKLLEKMTGE
RTIFFLDDVF SEFDPQRRRA LALYLEERQS FVTSAEPELK LPGRTFLIEQ GRLRAADY