Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_5405 |
Symbol | |
ID | 8451038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 6049969 |
End bp | 6051309 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645044435 |
Product | putative transcriptional regulator, GntR family |
Protein accession | YP_003204657 |
Protein GI | 258655501 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 82 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATGCAG GGACGGCCGG CGGCCGCACC CAGCCGGTCC ATCGGAGCGC CGCCACGGGC ACCAGCCTGG ATCAGCACAT CGACCGGTAC GCCCAGCGCA CCACCGGGAT GCGGGCGTCG GCGATCCGGG CCCTGTTCGC GGTGGCCAAC CGGCCCGAGG TGGTCTCGCT GGCCGGCGGC ATGCCGTTCC TGCGGTCGCT GCCGTTGGAG GCGCTGGCCG TGGAGGCCTC CGAGCTGGTC GTACAGGACG GGCTGACCGC CCTGCAGTAC GGCTCCGGGC AGGGCGTGCC CGAACTGCGC GAGCAGATCT GCCAGGTGAT GGCCCTGGAG GGGATCACCG CGCACCCCGA CGACGTGATG GTCACCGTCG GCTCGCAGAT GGCGCTGGAC CTGACCACCC GCATCTTCAT CGATCCCGGC GACGTGATCC TGGCCGAGGC GCCGTCCTAC GTCGGCGCCC TGGGCACGTT CCAGTCCTAT CAGGCCCAGG TGGTGCACGT CGCCATGGAC GACGACGGCC TGATCCCCGA GGCCCTGGTC GCCGCGATCG ACAGCTGCCG GGCCAGCGGC CGCCGGATCA AGCTGCTGTA CACGATTCCG AACTTTCATA ATCCGGCCGG CGTCACCCTC TCCGACGCCC GGCGGGCCCG GATCGCCGAG ATCTGCCGGG TCGCCGACAT CGCCATCCTG GAGGACAACC CGTACGGGTT GCTCGGGTTC GACGACCGGC TGCGCCGCGC GATCCGGGCC GACGACGCCG ACAACGTGAT CTACCTGGGT TCGTTCTCCA AGACCTTCGC CCCCGGCCTG CGGGTCGGCT GGGTACTGGC CCCGCACGCC GTCCGCGAGA AGCTGGTGCT GGCCAACGAA TCGGCCACGC TGAATCCGCC GGTGTTCAAC CAGATGCTCA TCTCCCGGTA CCTGAGCGGC TTCGACTGGC GCGGTCAGAT CAAGGCCTAC CAGCAGACCT ACGCCGAGCG GCGGGACACC ATGCTGGCCG CCCTGGCCGA GATGATGCCC GAGGGCACCA CCTGGACCAC CCCGGACGGC GGCTTCTACG TGTGGGTCAC CCTGCCGCCC GGGTTCGACA CGGCCGCCAT GCTGCCCCGG GCGGTCACCG CGCGAGTCGC CTACGTGCCC GGAACCGCCT TCTACGCCGA CGGTCTGGGC ACCCGGCAGC TGCGGCTGTC GTACTGTTTC CCCACGCCGG AACGGATCAC CGAGGGTGTG CGCCGGTTGG CCGGCGTCAT CGCCAGCGAG CTGGACGTCA TGCAGACCTT CGGCACCAGC GCGGCCCGGC CGATCTCCGG CCCGTCCTCC CCGTCGCCCG ACACCGCCTG A
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Protein sequence | MNAGTAGGRT QPVHRSAATG TSLDQHIDRY AQRTTGMRAS AIRALFAVAN RPEVVSLAGG MPFLRSLPLE ALAVEASELV VQDGLTALQY GSGQGVPELR EQICQVMALE GITAHPDDVM VTVGSQMALD LTTRIFIDPG DVILAEAPSY VGALGTFQSY QAQVVHVAMD DDGLIPEALV AAIDSCRASG RRIKLLYTIP NFHNPAGVTL SDARRARIAE ICRVADIAIL EDNPYGLLGF DDRLRRAIRA DDADNVIYLG SFSKTFAPGL RVGWVLAPHA VREKLVLANE SATLNPPVFN QMLISRYLSG FDWRGQIKAY QQTYAERRDT MLAALAEMMP EGTTWTTPDG GFYVWVTLPP GFDTAAMLPR AVTARVAYVP GTAFYADGLG TRQLRLSYCF PTPERITEGV RRLAGVIASE LDVMQTFGTS AARPISGPSS PSPDTA
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