Gene Namu_5342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5342 
Symbol 
ID8450975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5976887 
End bp5978986 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content73% 
IMG OID645044373 
Product5-oxoprolinase (ATP-hydrolyzing) 
Protein accessionYP_003204595 
Protein GI258655439 
COG category[E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACC CTGCCGCCGG GAACGGGCCC GGCATCCGGA CTGGCATCAG GATCGGCATC 
GACACCGGGG GCACGTTCAC CGACGTGGTG GCCGTGCACA CCGCCACCGG CCGCCGGGTC
AGCACGAAAA CCCCGTCCAC GCCCGACGAT CCGTCCACGG CGTTCGTTCG CGGGCTGGCT
GCGGCGCTGG CGCTGCTGGC CGCCGGTTCG GACGAGGTGG ACTCGGTGCG GCACGGCACC
ACGGTGGCCA CCAACCAGCT GTTGCAGGGC GCGGTCGGCT CGCTCGGCCT GATCACCACC
GAGGGCTACG AGTCGATCCT GGAGATCGCC CGGCAGTCGG TGCCCGAGGG CTACGGCAAC
TCCTACTTCT GGGTGAAGCC GCCGCGCATC GTGCCGGCCG ATCTGGTGCG CACCGTCGGT
GGCCGGCTGG ATTTCAGCGG CCGCGAGATC CGCGCGTTCG ACGAGGATTC CGCGGTGGCG
GCGGTGAGGT ACCTGCGGGC CCGCGGCGTC GAGGCCATCG GGGTCTGCCT GCTGCACGCC
TACGCCGACG ACCGGCACGA GCGCCGGCTG GCGCAGATCA TCGCCCGGGA ATACCCGCAG
GCAATGGTGT CCCTGTCCAG CCAGGTCCTG CCCGAGTACC GCGAGTACGA GCGGGCGATG
ACCACCCTGG TCGACGCGGC GGTGAAACCG ACCGTGGCCG GCTACATCTC GCGGATCGAG
GACCGGTTGG CCGGGCTGGC CGGGGACCAC TCGATCCCGT TCTCGGTGAT GCGGTCCAAC
GGCGGGGTGC TCTCGGTCGC CGAGGTCGTC GAGCAGCCGA TCAGCACCGT GCTGTCCGGG
CCGGCGGCCG GCGTGCTGGG GGCGGCGGCC ATCGCACACC GGGCCGGTTT CGACTCGATC
GTCACCTGCG ACGGTGGCGG CACCTCCACC GATGTCGCCG TCGTCCGGGA CGGCCGCCCG
GCGGTGACGA CCGACGCCTG GGTCGGGGAC TTCCCGGTCC GGGTACCGAT GGTCGACGTG
GTCACGGTCG GCGCCGGCGG CGGATCGATC GCCTGGGTCT CGCCGGAGCG GACCCTCAAG
GTGGGGCCCC GATCCGCCGG GGCGTCGCCC GGCCCGGCCT GTTATGGCCG CGGCGGGACC
GAGCCGACGG TCACCGATGC GGCCGTGCTG CTCGGGCGCA TCCCGCCGCA TCTGCTCGGC
GGCGCCGTGC CGCTGGATCC GGCGGCCGCC GCCGCGGCCG TCGACCCGGT GGCCACCGAG
TTGGGCCTGA CCGGACCGGA CTGCGCCGCC GGCATTCTCG AGATCTTCGC CTGGAACCAG
GCCAATGCGT TGCGCCGCAT CACCACCGGG CGTGGCCTGG ACGTCCGCGA CTTCCCCCTG
GTCACCTTCG GCGGATCCGG GTCGCTGCTG GCCTGCCGGT TGCTGGACCT GCTCGGCTCG
CCGACGGTGC TGGTGCCGCC CGATCCGGGC AACGTGTGTG CCTACGGCCT GCTCACCGTC
GACGTGCGCT GCGACGACCT GCGGACCTGG GTGCAGCGGG ACGACGACCT GGACCCGACC
GAGCTGGCCC TGACCTACGA CCTGCTGCTG TCGCGGGTCG GAGATGCGTT GCGGCGGGAG
GGATTCGACC GGTCGACCGG GGTGCTGCAG CGGGTGGCCG ACCTGCGCTA CGTCGGTCAG
GCCTACGAGG TCGGAGTGCG CGGCCCCGAC GGGCCGATCG ACCGGGACTG GGCCGATGCG
GTGGTGGCGC GGTTCCACCG GGCCCACCAC GCGCTCTACG GGTACGACTT TCGCGACCGA
AGCGACCAGC CGGTCGAGTG GGTCAATCTG CGGGTCACCG GGATCGGGCC GATCGAGCGA
CCACCGGTGC CCGAGATCCC CGCCACCACG GGCGCTCCCG TGGCGATCGG GGTGCGCCGG
GTGCGGTTCG GGGACTGGGT GGACACCCCG CTCTACGACC GGGGTGAGTT GCGTGCCGGC
GACGTCGTCG ACGGGCCCGC GGTGATCCAG GAGTTCGGCT CGACCGTGCC GGTGCATCCG
GGATTCCGGG CGGAGGTGGA CCGATGGGGC AACCTGCTGC TGACCAGGAC GAACCGGTGA
 
Protein sequence
MANPAAGNGP GIRTGIRIGI DTGGTFTDVV AVHTATGRRV STKTPSTPDD PSTAFVRGLA 
AALALLAAGS DEVDSVRHGT TVATNQLLQG AVGSLGLITT EGYESILEIA RQSVPEGYGN
SYFWVKPPRI VPADLVRTVG GRLDFSGREI RAFDEDSAVA AVRYLRARGV EAIGVCLLHA
YADDRHERRL AQIIAREYPQ AMVSLSSQVL PEYREYERAM TTLVDAAVKP TVAGYISRIE
DRLAGLAGDH SIPFSVMRSN GGVLSVAEVV EQPISTVLSG PAAGVLGAAA IAHRAGFDSI
VTCDGGGTST DVAVVRDGRP AVTTDAWVGD FPVRVPMVDV VTVGAGGGSI AWVSPERTLK
VGPRSAGASP GPACYGRGGT EPTVTDAAVL LGRIPPHLLG GAVPLDPAAA AAAVDPVATE
LGLTGPDCAA GILEIFAWNQ ANALRRITTG RGLDVRDFPL VTFGGSGSLL ACRLLDLLGS
PTVLVPPDPG NVCAYGLLTV DVRCDDLRTW VQRDDDLDPT ELALTYDLLL SRVGDALRRE
GFDRSTGVLQ RVADLRYVGQ AYEVGVRGPD GPIDRDWADA VVARFHRAHH ALYGYDFRDR
SDQPVEWVNL RVTGIGPIER PPVPEIPATT GAPVAIGVRR VRFGDWVDTP LYDRGELRAG
DVVDGPAVIQ EFGSTVPVHP GFRAEVDRWG NLLLTRTNR