| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5339 |
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| Symbol | |
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| ID | 8450972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 5973285 |
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| End bp | 5974691 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645044370 |
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| Product | glutamate decarboxylase |
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| Protein accession | YP_003204592 |
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| Protein GI | 258655436 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 66 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGC ATACCGGTTC GTCCGAGCCG ACTCACCCCC CGCACACGAA TCCGATGGCC
ACGTTGGCCT CGCCGGCCGT CGGCGACGCC TTCGCGCTCC CGGAGATCTC CCTCAACGAG
GATCCGGTCC CCCCGGACAT CGCCTACCAG CTCATCCGGG AGGAGCTGCT GCTGGACGGC
AGCGCCCGGC TGAACCTGGC CACCTTCGTC ACCACGTGGA TGGAGCCCCA GGCCAAGCAG
CTGATGTCGG ACTGCGCCGA CAAGAACATG ATCGACAAGG ACGAGTACCC GCAGACCGCG
GAGATCGAGC GGCGCTGCGT CGGGATCATC GCCGACCTGT GGCACGCGCC CTCCCCCGAC
GACGCGACGG GCTGCTCGAC CACCGGGTCC AGCGAGGCCT GCATGCTGGC CGGCATGGCG
CTCAAGCGCC GCTGGGAGGC CAAGGTCCGG GCCGAGGGCG GCGACCTGAA CGTCCGCAAG
CCCAACCTGG TGATGGGCGC CAACGTCCAG GTCTGCTGGG AGAAGTTCTG TCGCTACTGG
GACGTCGAGC CCAAGATCGT GCCGATGGAG GGTGAGCGGT TCCACCTGGA CGCCGACGGT
GCGGTGGCCG CGGTCGACGA GAACTCCATC GGCGTCGTCG CCATCCTGGG TTCCACCTTC
GACGGCAGCT ACGAGCCGGT CGCCGAGATC GCCGCCGCCC TGGACAAGCT GGCCGCCAGC
GGCGGTCCGG ACGTTCCGGT GCACGTGGAC GGCGCCTCCG GCGGCATGAT CGCGCCGTTC
CTGGACCCCG ATCTGGAGTG GGATTTCCGC CTCCCGCGGG TCTCCTCCAT CAACACCTCG
GGCCACAAGT ACGGGCTGGT CTACCCCGGT GTCGGCTGGG TCGTGTGGCG GGACAAGGAC
CATCTGCCCG ACGAGCTGGT GTTCAACGTG AACTACCTGG GCGGGAACAT GCCCACCTTC
GCGCTGAACT TCTCCCGGCC CGGGTCCGAG GTCATCGCCC AGTACTACTG CTTCTTCCGG
CTCGGTCGCT CCGGCTACGT CGACGTCCAG CAGGCCAGTC GCAACGTGGC GATGAACCTG
GCCGAGCAGA TCGGCGAACT GCCCGAATTC CGGCTGATCA CCAAGGGCGA CCAGCTGCCG
GTCTTCGCCT TCACCACGTC CGAGTCGGTC ACCGGCTGGG ACGTCTTCGC GCTCTCCCGC
CGCATGCGCG AGCGCGGATG GCAGGTGCCC GCCTACACCT TCCCCGAGCA CCGCGAGGAT
CTGGCCGTCC TGCGCATCGT CGTGCGTAAC GGGTTCTCCC AGGACATGGC GCACCTGTTC
TTCCAGGAGC TCAAGGGCGC CGTGCAGTCG CTGAACGAGG AATCGACGTC GGCCGCGATG
AGCGGGCCGT CCGGCTTCCG GCACTGA
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| Protein sequence | MALHTGSSEP THPPHTNPMA TLASPAVGDA FALPEISLNE DPVPPDIAYQ LIREELLLDG
SARLNLATFV TTWMEPQAKQ LMSDCADKNM IDKDEYPQTA EIERRCVGII ADLWHAPSPD
DATGCSTTGS SEACMLAGMA LKRRWEAKVR AEGGDLNVRK PNLVMGANVQ VCWEKFCRYW
DVEPKIVPME GERFHLDADG AVAAVDENSI GVVAILGSTF DGSYEPVAEI AAALDKLAAS
GGPDVPVHVD GASGGMIAPF LDPDLEWDFR LPRVSSINTS GHKYGLVYPG VGWVVWRDKD
HLPDELVFNV NYLGGNMPTF ALNFSRPGSE VIAQYYCFFR LGRSGYVDVQ QASRNVAMNL
AEQIGELPEF RLITKGDQLP VFAFTTSESV TGWDVFALSR RMRERGWQVP AYTFPEHRED
LAVLRIVVRN GFSQDMAHLF FQELKGAVQS LNEESTSAAM SGPSGFRH
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