Gene Namu_5306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5306 
Symbol 
ID8450939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5930764 
End bp5932197 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content67% 
IMG OID645044339 
Productsoluble pyridine nucleotide transhydrogenase 
Protein accessionYP_003204561 
Protein GI258655405 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGCT ACGACATGAT CGTCATCGGG TCGGGTCCGG CCGGGCAGAA GGCGGCCATC 
GCGGCGGCGA AACTGGGCCG GCGGGCCGCC ATCGTCGAGC GCAAGGACAT GGTCGGCGGC
GTCTGCATCA ACACCGGCAC CATCCCGTCC AAGACACTGC GCGAAGCGGT GCTCTACCTG
ACCGGGCTCA ACCAGCGGGA GCTGTACGGG CAGTCCTACC GGGTCAAGCA GGACATCACC
ATCGCTGACC TGTCCTCACG CACCCAACAC GTCATCGCCC GCGAGATCGA TGTCATCCGC
AACCAGCTGG CCCGCAACCA CGTGCACATG TACGTCGGCA CCGCGCGGTT CATCACCCCG
CGCACCATCG TGGTCACCAA CGAGGCCGGC AATTCGGTCG AGCTCAGCGC CGACAAGATC
GTCATCGCGG TGGGCACCAA ACCCGCCCAC CCGAGCACCG TCGAATTCGA CGGGGAGACC
ATCGTCGACT CCGACCAGAT CCTGAGCATC GCCAAGGTGC CGTCGTCGAT GGTGGTGGTC
GGGGCCGGCG TCGTCGGCAT CGAGTACGCC TCCATGTTCG CCGCCCTGGG TACCAAGGTG
ACCATCGTCG AGCGCCGACC GACGATGCTG GACTTCTGCG ACAAGGAGAT CATCGAGGCC
CTGCAGTACC AGCTGCGCGA GTTGGCCGTG ACCTTCCGGT ATTCCGAGAC CGTGCGGGAG
GTGCAGAGGC ATCCGGCCGG CACGCTGACC GTGCTGGAGT CGGGCAAGCG GATCCCGGCC
GACACGGTGC TGTACTCGGC CGGCCGGCAG GGTCTGACCG ACGAACTCAA CATCGCCGCG
GCCGGGCTCG GCGCCTCCGA TCGGGGCAAG ATCGAGGTCA ACGAGAACCT GCAGACCGAG
GTCGAGCACA TCTACGCGGT CGGCGACGTG ATCGGGTTCC CCGCGCTCGC CGCGACGGCC
ATGGAGCAGG GTCGCCGGGC CGCGTACCAC GCGTTCAACG AGCCGGTCGG CAACAAACTG
GGCGACCTGC AGCCCATCGG CATCTACACG ATCCCTGAGC TGAGCTTCGT CGGCCGCACC
GAGGAGTCGC TGACCAGCGC GAACGTGCCG TTCGAGGTGG GGGTGTCGCG GTACCGCGAG
CTGGCCCGCG GGGCGATCCT GGGCGACTCC TACGGCATGC TCAAGATCCT CGTGCACGCC
GAGTCCCGTG AACTGCTGGG CGTGCACGTC TTCGGCACCA ACGCCACCGA GCTGGTGCAC
ATCGGCCAGA TGGTGATGGG CTGCGGCGGC ACCGTGGACT ACCTGGTCGA CACCGTGTTC
AACTACCCGA CCCTGGCCGA GTCCTACAAG GTGGCCGCCC TGGACGCGGT GAACAAGATG
CGGGCCATCG CCAAGGTCAC CCAGACCGGC CCATACCACC CGCTGCCCGA GTAG
 
Protein sequence
MDSYDMIVIG SGPAGQKAAI AAAKLGRRAA IVERKDMVGG VCINTGTIPS KTLREAVLYL 
TGLNQRELYG QSYRVKQDIT IADLSSRTQH VIAREIDVIR NQLARNHVHM YVGTARFITP
RTIVVTNEAG NSVELSADKI VIAVGTKPAH PSTVEFDGET IVDSDQILSI AKVPSSMVVV
GAGVVGIEYA SMFAALGTKV TIVERRPTML DFCDKEIIEA LQYQLRELAV TFRYSETVRE
VQRHPAGTLT VLESGKRIPA DTVLYSAGRQ GLTDELNIAA AGLGASDRGK IEVNENLQTE
VEHIYAVGDV IGFPALAATA MEQGRRAAYH AFNEPVGNKL GDLQPIGIYT IPELSFVGRT
EESLTSANVP FEVGVSRYRE LARGAILGDS YGMLKILVHA ESRELLGVHV FGTNATELVH
IGQMVMGCGG TVDYLVDTVF NYPTLAESYK VAALDAVNKM RAIAKVTQTG PYHPLPE