Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_5294 |
Symbol | |
ID | 8450927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 5912828 |
End bp | 5914627 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645044327 |
Product | peptidase S15 |
Protein accession | YP_003204549 |
Protein GI | 258655393 |
COG category | [R] General function prediction only |
COG ID | [COG2936] Predicted acyl esterases |
TIGRFAM ID | [TIGR00976] putative hydrolase, CocE/NonD family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 59 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCGTC GCGGCGCCGA CCCGACCACC GACACCCGCT GGAGCCGTGC CCGCACCGCG CTGCGCCGGA TCCTGCGGCC ACCGATCACG ATCACCGACC CACCCGCCGG CGCGTTGGCC CAGTGGGACG TACCGGTGCC GATGCGGGAC GGCGTCCACC TGCGGGCCAA CGTGTTCCGG CCGCTCGGGG ATGGACCGTT CCCGGTCCTG CTGTGCGCCC ACCCCTACGG CAAGGACGAC ATCCCGCTGC ACCACCGGAC CCGACGGGGC TACCGGCCCT CGCTGCAGTA CCGGCTCATG CGCAGTGCCC CGGTCACCCA TTCGGCCTGG ACGTCGTGGG AGGCGCCCGA TCCGGCCCAC TGGGTGGGCC GCGGCTACGT CGTCGTCAAC GCCGACCTGC GGGGCTGGGG CACCTCGGAA GGCGAGCCGA CCGCCCTGTC CGCCCAGGAA GGTCTGGACG TGCACGACCT CGTGCAGTGG GCCGGCACCC AGCCGTGGAG CAACGGGCGG GTGGGCATGA GCGGGGTGTC CTATCTGGCC CTGAGCCAGT GGGCGGGGGC GGCGACCCGG CCGTCGCACC TGGCCGCCAT CTGCCCGTGG GAGGGCTTCA CCGACTGCTA CCGCGACTTC GCCCGACCCG GCGGGATCCT GGAGACCGGC TTCCTGACCG TTTGGGGCAC CGCGATGCGG CGCCGCAGCC GGGGCCGGGT CGACCTGCTC GGGCCGGCCC GCCGGCGCCG GGAGTTCGAC CAGTGGTGGG CCGACCGCGA TCGGGACCTG GCGCGGATCG ACGTGCCCGC GCTGATCTGT GGCAGCTTCT CCGACCACAA CCTGCACACC GCCGGCTCGT TCGAGGGCTT TCGGCGGATC GGTTCGGCGC ACCGCTGGCT CTACACCCAC CGCGGCCCCA AATGGGCCAC CTACTACTCA CCGGAGGCAC TGGCCGCCCA GGCCCGCTTC TTCGACCATT TCGTCAAGGG ACAGGACACC GGCATCGCCG ACCAGCTCCC CGTCCGGCTG GAGATCCGGG ACGACCGGAC GACGATCACC CGGGTCGGCG ACCACGCCGA CTGGCCGCCG CCCGGCATCG GCTGGCGCAC GCTGCACTGT CGCCCGGACG GCACCCTGAC CGACCCCGGG ACCGACACCG ACCCCGGGGC CGACACTGGC ACCGACACCG ACCCCGGGGC CGACACTGGC ACCGACACCG AGAGCGACAT CGGGCCGACC ACCGTCGGCT TCGCGGCCCG GCGGGGCCGG ATCAGCTTCA CCCACCGCTT CGCCGCCGAC ACCGACGTGG TCGGCCCGAT GGAGTTGAGC CTGACCCTGT CCGTGGACGC CGGTGACGAC CTGTCGGTGT TCGCCGGCGT CCGCAAGTTC CGCGACGGCC GGGAGATCAC CTTCGAGGGT TCGTACGGCT TCCAGGGGGA CCTGGTGACG CACGGCCTGC TGCTGGCCTG TCACCGGGCG CTCGATCCGA GCCGGTCCCG CGACGGGGTG CCCTGGCACC CGCACACGGC CCGGGAGCCC CTGGTCGCGG GCCGGCCGGT TCGGTTGCGG ATCGGCCTGC TGCCCTCGGC CACCCACTTC CGCGCGGGCG ACGAGCTGCG CCTGGACGTC CAGGCGCATT GGTTCCACGG CCGCAACCCG CTGCTGGGTC AGTTCCCGGC CGGCTACCGG CGGGTCGGCC GCGGCACCGC CACCCTGCAC CTGGGCGCAC CGGGCTGCGA CCTGCGCATC CCGGTGCTCG ACCGGGACGA TCAGGAAGCG CCCTTCCTTG CGCAAGTTAC TCGCCAGTAA
|
Protein sequence | MIRRGADPTT DTRWSRARTA LRRILRPPIT ITDPPAGALA QWDVPVPMRD GVHLRANVFR PLGDGPFPVL LCAHPYGKDD IPLHHRTRRG YRPSLQYRLM RSAPVTHSAW TSWEAPDPAH WVGRGYVVVN ADLRGWGTSE GEPTALSAQE GLDVHDLVQW AGTQPWSNGR VGMSGVSYLA LSQWAGAATR PSHLAAICPW EGFTDCYRDF ARPGGILETG FLTVWGTAMR RRSRGRVDLL GPARRRREFD QWWADRDRDL ARIDVPALIC GSFSDHNLHT AGSFEGFRRI GSAHRWLYTH RGPKWATYYS PEALAAQARF FDHFVKGQDT GIADQLPVRL EIRDDRTTIT RVGDHADWPP PGIGWRTLHC RPDGTLTDPG TDTDPGADTG TDTDPGADTG TDTESDIGPT TVGFAARRGR ISFTHRFAAD TDVVGPMELS LTLSVDAGDD LSVFAGVRKF RDGREITFEG SYGFQGDLVT HGLLLACHRA LDPSRSRDGV PWHPHTAREP LVAGRPVRLR IGLLPSATHF RAGDELRLDV QAHWFHGRNP LLGQFPAGYR RVGRGTATLH LGAPGCDLRI PVLDRDDQEA PFLAQVTRQ
|
| |