| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5179 |
|---|
| Symbol | |
|---|
| ID | 8450810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5769976 |
|---|
| End bp | 5770665 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 645044212 |
|---|
| Product | cobalamin (vitamin B12) biosynthesis CbiM protein |
|---|
| Protein accession | YP_003204436 |
|---|
| Protein GI | 258655280 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 74 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACATCC CCGACGGGTT CATCAACGCG CCGACGTCCA TCGTCGGCGG GGTGCTGGCG
GCCGGTCTGA TCGCGGTGTC GATCAAGAAG GCGGGCGACG CGCTGGACGA CCGGCAGCTG
CCGCTGGCCG GCCTGGTCGC GGCCTTCATC TTCGCCCTGC AGATGCTCAA CTTTCCGGTT
GCCGGCGGCA CCAGCGGGCA TCTGCTCGGC GGCTGTCTGG CCGCCGTGCT GGTCGGTCCG
TGGGTCGGCA GCCTGGCCAT GTCGGTGGTG TTCATCGTGC AGGCGCTGGT CTTCGCCGAC
GGCGGCCTGA CCGCGCTGGG CCTGAACATC ATCCTGATGG GCTACACCAC CTGCTTCGTC
GGCTACGGCA TCTTCCGGCT GCTGCGCCTG GTGCTGCCCC GCTCCAGGAC GGGCGTCACC
CTGGCCGCCG GCGGGGCCGG CTGGTGCGGG GTGGTCGCCG CATCGATCGT CTTCGTCGGG
TATTACGCGA TCGGCGGGAC GGGCGGCGCG TCGACCGGCA CCGTCGCGGT GGCCATGATC
GGAGTGCACA TGCTGATCGG CATCGGCGAG GCGGTGATCA CCGGCCTGAC CGTCGGTGCG
GTGATGGCCA CCCGGCCCGA CCTGGTCTAC GGCGCGCAGG ACCTGCGCGC CGCCCTGGTC
ACCGGCGATC CGGCCGGGCA GCCGTCATGA
|
|---|
| Protein sequence | MHIPDGFINA PTSIVGGVLA AGLIAVSIKK AGDALDDRQL PLAGLVAAFI FALQMLNFPV
AGGTSGHLLG GCLAAVLVGP WVGSLAMSVV FIVQALVFAD GGLTALGLNI ILMGYTTCFV
GYGIFRLLRL VLPRSRTGVT LAAGGAGWCG VVAASIVFVG YYAIGGTGGA STGTVAVAMI
GVHMLIGIGE AVITGLTVGA VMATRPDLVY GAQDLRAALV TGDPAGQPS
|
|---|
| |