Gene Namu_5115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5115 
Symbol 
ID8450746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5702020 
End bp5703114 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content73% 
IMG OID645044150 
Productchalcone and stilbene synthase domain protein 
Protein accessionYP_003204374 
Protein GI258655218 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3424] Predicted naringenin-chalcone synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGT CGAGGACCGA CCGGGCCCGC ATCCTGGCCG TCCGCGGGGC TCTGCCCGCC 
CATCGCTCCC GGCAGGCCGC GATCACCGAC GCCTTCGCCG CCGCGATCCA CCCGTCGCGC
GCGACCGAGC GTGTGCTGCG CAGCCTGCAC GGCAACTGCG GGGTCGAGCA GCGCCACCTG
GTGCTGCCGC TGGCCGACTA CGCCGACCTG CGTTCCTTCG ACCAGGCCAA CGACCTGTTC
CTCGAGCACG CGGTGGCGTT GGGCGCCCGG GCCCTGGAGG ACGCGCTCAA GGCCGCCGGC
CTGACGCCGA CCGATGTCGA TCTGATCATC TCCACCACCG TCACCGGCCT GGCCGTCCCC
TCCCTGGACG CCCGGATCGC CGCGGTCGTC GGCCTGCGGC CGGACGTGCG CCGGGTGCCG
CTGTTCGGCC TGGGGTGCGT GGCCGGCGCC GCCGGCATCG CCCGGCTGCA CGACTACCTG
ATCGGCCATC CCGACCACGT CGGCGCCCTG GTGGCCGTCG AGCTGTGTTC GTTGACCGTG
CAACGCGACG ATTCCTCGCT GCCGAATCTG GTGGCCAGCG GTTTGTTCGG GGACGGCGCC
GCCGCGGTCA TCGCCGCCGG GCGTCACTCG CAGGCCCCGG ATGCCGACCG GGCCGTGCAG
GTCCTGGCCA GCCGTAGCCG CCTGTACCCC GACTCGGAAC GGACCATGGG CTTCGACTTC
GGGGCCAGCG GGTTGCGGAT CGTGCTCGAC GCCCAGGTGC CCGCCCTGGT CACCCAGTAC
CTCGGCGACG ACGTCGACGC CTTCCTGGCC GATCACGGCC TGGACCGGGC CGACATCGGC
TTCTGGGTGT GCCATCCCGG CGGGCCGAAG GTGATCGACG CGGTCCGGGA CGTGCTGGAC
CTGTCCGACC GGGACGTCGG CCTGACCCGA TCGTCGTTGG CCCGGATCGG CAACCTGTCC
TCGGCCTCGG TGCTGCATGT GCTGGCCGAC ACCCTGCGGG AGCGGCCGCC GGCCCCGGGC
ACCTTCGGCG TCCTGCTGGC CATGGGCCCC GGCTTCTGCT CGGAACTGCT GCTGTTGCAG
GCGGCGTCGT CATGA
 
Protein sequence
MTPSRTDRAR ILAVRGALPA HRSRQAAITD AFAAAIHPSR ATERVLRSLH GNCGVEQRHL 
VLPLADYADL RSFDQANDLF LEHAVALGAR ALEDALKAAG LTPTDVDLII STTVTGLAVP
SLDARIAAVV GLRPDVRRVP LFGLGCVAGA AGIARLHDYL IGHPDHVGAL VAVELCSLTV
QRDDSSLPNL VASGLFGDGA AAVIAAGRHS QAPDADRAVQ VLASRSRLYP DSERTMGFDF
GASGLRIVLD AQVPALVTQY LGDDVDAFLA DHGLDRADIG FWVCHPGGPK VIDAVRDVLD
LSDRDVGLTR SSLARIGNLS SASVLHVLAD TLRERPPAPG TFGVLLAMGP GFCSELLLLQ
AASS