Gene Namu_4962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4962 
Symbol 
ID8450593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5544402 
End bp5545796 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content69% 
IMG OID645044000 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003204224 
Protein GI258655068 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACG GGCGACACCG GGTGGTCGTG GTCGGCGGCG GGTTCGGCGG GCTGAACGCG 
ACCCGCTACT TGAAGGATGC TCCCGTCGAC GTCACGATCG TCGATCGCAC CAACCACCAC
CTGTTCCAGC CGTTGCTGTA CCAGGTCGCG GCCGGACTCA TCTCGCCCGG GCTGATCGCC
CCGGCCATTC GGGCCACCAT CAAGAAGCAG CGCAACGCGC GGGCCCTGCT GGGCGAGGTC
AAGGACCTCG ACCTGGCCAA CAAGGTGGTC AAGGCGCTCG GCCCGGACGG CCGGCCGCTG
GACCTGGAGT ACGACTCCCT GGTCGTCGCC GCCGGCGCCT CGCACTCGTA CTTCGGCAAG
GACGAGTTCG CCGAGTTCGC CCCGGGCATG AAGACCATCG AGGACGCCCG GTACCTGCGC
GACGGCATCC TGTCCAAGTT CGAGATGGCC GAGATGGCCA CCGACCCGGT CGAGCGGGCC
GAATGGCTGA CCTTCGTGGT CATCGGCGCC GGCCCGACGG GCGTCGAGCT GGCCGGTCAG
CTGGCCGAGC TGGCCCACCT GGTGCTGCCG CAGGAGTACC GCACGGTGGA CACCACCGAG
GCGCGGATCA TCCTGCTCGA GGGTGCCCCC GCGGTGCTGC CGCCGTTCGA CGAGAAGCTG
CAGAAGTACA CCAAGGCCCA CCTGGAGAAG ATGGGCGTGG AGATCCGGGT CAACACCCTG
GCCACCGACA TGAACCACGA GTCGATCACG GTCAAGGGCC CGAACGGGGT GGAGACCATC
CGCGCCCGCA CCCGGATCTG GGCGGCCGGC GTGCAGGCCT CCCCGCTGGC CAAGATGCTG
GCCGAGAAGA CCGGCGCCGA GCTCGACCGG GCCGGCCGCG TCTCGGTCAA CCCGGACTGC
AGCCTGCCCG GACATCCCGA GGTCTTCGCC ATCGGCGACA TGGTCTCGCT CAACAAGCTC
CCCGGGGTGG CCCAGCCGGC CATGCAGGAG GGCAAGTACG TGGCCAAGCT GATCAAGGCC
CGGACCACCG GCGCCCCGAT CCCGCCGCCG TTCAAGTACT TCGACAAGGG CAGCATGGCG
ACCATCGGCC ACAAGGCCGC CGTCGCCGAC GCGTTCGGCT ACAAGTTCAC CGGCTTCATC
GCGTACCTGA TGTGGGGCTT CATCCACGTC GCGTACCTGG TCGGCTGGGG CAACCGGCTG
GGCACCCTGT ACAACTGGGC CCACTCGCTG TGGTTCAGCA AGAGCCGCGG CCACCGCATC
ATCACCTTCG AGCGCACCAT GGTCGAGCTC GACGAGAACC GCAAGAAGGG CCGCGCCCCG
GTCGTCCTGC CCGGGTCCAA GCCCTCGCTG GCCGACGAGA TCGACGCCGC GGAAGGCGCT
CCAAAGACCG CCTGA
 
Protein sequence
MSNGRHRVVV VGGGFGGLNA TRYLKDAPVD VTIVDRTNHH LFQPLLYQVA AGLISPGLIA 
PAIRATIKKQ RNARALLGEV KDLDLANKVV KALGPDGRPL DLEYDSLVVA AGASHSYFGK
DEFAEFAPGM KTIEDARYLR DGILSKFEMA EMATDPVERA EWLTFVVIGA GPTGVELAGQ
LAELAHLVLP QEYRTVDTTE ARIILLEGAP AVLPPFDEKL QKYTKAHLEK MGVEIRVNTL
ATDMNHESIT VKGPNGVETI RARTRIWAAG VQASPLAKML AEKTGAELDR AGRVSVNPDC
SLPGHPEVFA IGDMVSLNKL PGVAQPAMQE GKYVAKLIKA RTTGAPIPPP FKYFDKGSMA
TIGHKAAVAD AFGYKFTGFI AYLMWGFIHV AYLVGWGNRL GTLYNWAHSL WFSKSRGHRI
ITFERTMVEL DENRKKGRAP VVLPGSKPSL ADEIDAAEGA PKTA