| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4909 |
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| Symbol | |
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| ID | 8450540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 5478201 |
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| End bp | 5480102 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645043948 |
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| Product | VanW family protein |
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| Protein accession | YP_003204172 |
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| Protein GI | 258655016 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACG AGTCCACCGC CCCGCCCGCG TCGTCCGCCC CATCGACCCC ATCGACCCCA
CCGGCCTCAT CGAACGAGTC AGCGGACACG GTGGCCCTGC CCGTCGCGGC CGCCCCGGCG
CCCGAGAACG GCTCCGGCGT CGATTCCGCC CGCCGCAACA AGATCATCGC CAGCGTGGTC
GGCGGCGTCG TCGCGGTGCT CGCCGCGGTC TACCTGGTGG ATCTGCTGAT GACCTCCGGC
ACGATCGAGC GCAACACCTC GGTCGCCGGG GTCGCGGTCG GCGGCCTGAC CCCGGAACAA
GCCGCTGCGG CGCTGACCGA GCAGGCCCTG CCGGAGTACT CGGCGCCCGT CGTGGTCGAC
GTGCACGGGG TGGCCACCCA GATCGACCCG ACCCAGGCCG GGCTGAGCAC CGATGTGGCC
GCCACCGTCC AGGCGTTGGG CACCCGGTCG GCGAACCCGT TCGTCCGGCT CTCTTCGTTC
TTCACCTCCA TCGAGCAGCC GCTCACCGAC GGCGTCGACG AGACGGCGCT GACCGCGGTC
GTGCAGGGCA TCGCCACCAG CACCGACCTG GCGCCGGTCG AGGGATCGGT CGCCATCGAC
AACGGCCAGG TGACCACGGT GCAGCCGGTC ATCGGCCGCA GCCTCGACGT GGCCGGATCG
GTCGAATCGA TCTCCGCGGC CTGGATCTCC GGCGGCCCCG GCGGCCTCGG CGGGCTGGTC
CTGCCGGTGT CCGCCGCGCC GGTCCGCGCC TCGGTCGAGG GCACCGAGCG GGCCGCGGCC
CAGGCCGCCA CCATCGTCTC CGCGCCGCTG ACCCTGACCG GTGGCGGCGC GACCGTCGAG
GTCGGGGCCG TCGAGCTCGG TGCGGCCACC ACCATCACCC CGGACAGCGC CGACGGCTTC
GTCGTGGCCG TCGACCCCGC GGCCGTGCTG GACGCGGTGC GGCCGGCGGT CGAGGCCACC
CAGAGCGCGC CGGTGGACGC CAAGGTCGTC ATCCGGGACG GGGCGCCGGT CGTCGAACCG
AGCGCGGCGG GCCGCGCACT GGACGCGGCG GCCACCGAGG CCGCGGTGGC CGCGGCCGTC
ACCACCCCGA ACCGCACCGT GGAGCTGGCC TACCAGCTCA GCGACCCGGC GTTCAGCACC
GAGCAGGCCA ACGCGCTGGG CATCAAGGAG GTCATCGGCG AGTTCACCAC CGGCGGCTTC
GCCGCCGCGT CCGGTGAGAA CATCCGGGTG GTCGCCGAGA AGGTCAACGG GGCCCTGGTG
ATGCCGGGGG CCACCTTCGG TCTGAACGAG TTCACCGGTC CGCGCGGGAC CGAACAGGGC
TACGTCCCGG CCGCGATCAT CCAGGAGGGC GCGCTGTCCA CCGCCGTCGG CGGTGGGATC
AGCCAGTTCG CGACGACCAC CTACAACGCC GCGTACTTCG CCGGGATGGG CGATGTCACC
CACACCCCGC ATTCCTTCTA CATCAGCCGG TACCCGGCCG GTCGCGAGGC GACCGTCTTC
GACGGCGAGA TCGAGCTGGC CTTCTCCAAC GACTACGACA CCGGGGTGCT GATCGAGACG
ATTTGGACCC CGTCCGACAT CACCGTGCGG CTCTGGGGCA CCAAGCACGT CCAGGTCGAG
TCGGTCAGCT CAGACCGGTT CAACTACACC TCGGCGCCGG TGATCGTGAA GCCGTACGGC
ACCGCCTGCA CCCCCTCCGG CGGCAGTACC GGGTTCAGCA TTGTCAACAC CCGGATCATC
AAGGACCTGG CCGGCAACGA GATCCGCCGG GAGGACTTCA CCACGGTCTA CAACGGTCAG
CAGAACGTGA TCTGCTCGCC GGCTCCGGCC GCCGCCAGCA CCGCGCCGGC GACGATGGAC
GCGGCCGCCG CCCCGGCGGC CGAGGTGCCG GCCGGCGGCT GA
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| Protein sequence | MTDESTAPPA SSAPSTPSTP PASSNESADT VALPVAAAPA PENGSGVDSA RRNKIIASVV
GGVVAVLAAV YLVDLLMTSG TIERNTSVAG VAVGGLTPEQ AAAALTEQAL PEYSAPVVVD
VHGVATQIDP TQAGLSTDVA ATVQALGTRS ANPFVRLSSF FTSIEQPLTD GVDETALTAV
VQGIATSTDL APVEGSVAID NGQVTTVQPV IGRSLDVAGS VESISAAWIS GGPGGLGGLV
LPVSAAPVRA SVEGTERAAA QAATIVSAPL TLTGGGATVE VGAVELGAAT TITPDSADGF
VVAVDPAAVL DAVRPAVEAT QSAPVDAKVV IRDGAPVVEP SAAGRALDAA ATEAAVAAAV
TTPNRTVELA YQLSDPAFST EQANALGIKE VIGEFTTGGF AAASGENIRV VAEKVNGALV
MPGATFGLNE FTGPRGTEQG YVPAAIIQEG ALSTAVGGGI SQFATTTYNA AYFAGMGDVT
HTPHSFYISR YPAGREATVF DGEIELAFSN DYDTGVLIET IWTPSDITVR LWGTKHVQVE
SVSSDRFNYT SAPVIVKPYG TACTPSGGST GFSIVNTRII KDLAGNEIRR EDFTTVYNGQ
QNVICSPAPA AASTAPATMD AAAAPAAEVP AGG
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