Gene Namu_4801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4801 
Symbol 
ID8450431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5339704 
End bp5340342 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content77% 
IMG OID645043840 
ProductAllophanate hydrolase subunit 1 
Protein accessionYP_003204065 
Protein GI258654909 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2049] Allophanate hydrolase subunit 1 
TIGRFAM ID[TIGR00370] conserved hypothetical protein TIGR00370 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.440705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGC CCACCCTCCG ACCGGCCGGC GACCGGGCGC TGCTGCTGGA GACCGGCGAC 
CCGCAGACCA CCGTCGGCGT CTGCGCCGTC CTGCGGGAGG CCGGCCGGCC CGAGATCGAG
GACCTGATTC CGGCGGCCGC CACCGTGCTC GTCCGCCTCG CCCCGGGCAC CGACCTGACC
GCTGTGGGGG ACTGGCTGCT GGCGACCGCG GCCACCGCCG AGTCGGCCGG CACCGACCGG
ACCGAGGCCG GGGAGCTGGT CATCCCGGTC CGCTACGACG GGCCCGACCT GGCCGACGTC
GCCGCCGCGA CCGGCCTGTC GCCGGCCCAG GTGATCGCCG CCCACACCGG AACTGCTTGG
CGGGCCGCGT TCGTCGGCTT CGCCCCGGGT TTTGCCTACC TCATCGGCGG GGATCGACGG
CTCGCCGTAC CCCGGCGTGC CCAGTCCCGG ACCGAGGTGC CGGCCGGGTC GGTGGCCCTG
GCCGGGGAGT TCTCCGCGGT CTACCCGCGC CGCTCCCCCG GCGGCTGGCA GCTCATCGGC
TCCACCGACG TCACGCTCTG GGACCAGGCG GCCGACCCGC CCGCGGCGAT CCAACCGGGC
CGCTGGGTGC GCTTCGTGAA CGAGGAGGAC CGGCCATGA
 
Protein sequence
MSRPTLRPAG DRALLLETGD PQTTVGVCAV LREAGRPEIE DLIPAAATVL VRLAPGTDLT 
AVGDWLLATA ATAESAGTDR TEAGELVIPV RYDGPDLADV AAATGLSPAQ VIAAHTGTAW
RAAFVGFAPG FAYLIGGDRR LAVPRRAQSR TEVPAGSVAL AGEFSAVYPR RSPGGWQLIG
STDVTLWDQA ADPPAAIQPG RWVRFVNEED RP