| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4552 |
|---|
| Symbol | |
|---|
| ID | 8450180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5064496 |
|---|
| End bp | 5066187 |
|---|
| Gene Length | 1692 bp |
|---|
| Protein Length | 563 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 645043593 |
|---|
| Product | long-chain-fatty-acid--CoA ligase |
|---|
| Protein accession | YP_003203820 |
|---|
| Protein GI | 258654664 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGT TCTCCGACGC CCTGTGCACA GCGGCGCAGG GCCCCACCGG CATGACCACT
GGCGAGCCGC ATGAGCCGGT TCGCACGTCC TGGGCCGATG TCCACGCCAA GGCCTGCGCC
GGGGCGCGGG TGCTGGCCGC CCACGGGATC GGGCCGGGTG ACGCGGTCGC GGTGCTGGCC
GCCAAGCCGT TCGAGGTGGC CCCGATCGCC CAGGCGGCCT GGTTGGCCGG GGCCTCGGTG
ACGATGCTGC ACCAGCCCAC CGCCCGGACC AATCTGATGA CCTACGCGCA GGACACGGCC
GCGGTGCTGT CCCTGGTCGG GGCCAAGGCA GCCGTGCTGG GCGACCCGTT CACCGAGTTC
GCGGAACTGT TGGACGGTTC GGGCGTGCTC GCGCTGACCG TCGACGATCT GCTGGCCGAG
CCCGGCGGTC CGGCTCCGGA CGTCGAGATC GGCGAGGACC TGCCGGCCCT GCTGCAGCTG
ACCTCCGGGT CGACCTCGAC CCCCAAGGCC GTGCGGATCA CCCACCGCAA CCTGTGGGCC
AACATCGAGG CGATGTGCCA GGCGGCCCAG ATCCGGCCGG GCGAGGTGAT GGTGTCCTGG
TTGCCGCTGT TCCACGACAT GGGCATGGTC GGCTTCCTGA CCCTGCCGAT GTGCCGGGGC
ATCGAGCTGG TCACCGTCAC CCCCACCGAT TTCCTGGCCT CGCCGTTGAT CTGGCCGACG
TTGATCAGCA AGTACCGCGG CACCATCACC GCCGCCCCCA ACTTCGCCTT CGCGCTGACT
GCGCGGGTGC TGGCCCGGCC GACCACCCGG GAGCTGGGCC TGGACCTGTC CTGCATGCGG
TTCGCGCTGA ACGGGGCCGA ACCGATCGAC GTCGCCGCGG TCCGGGCCTT CCTGGCCGCG
GGGGCACCGT TCGGGCTCCC GGAGACCGCG GTGGTCTGCG CCTACGGCAT GGCCGAGGCG
TCGTTGGCCG TGTCCTTCCA CCCCTGGGGC ACCCCGCTCA AGGTGGACAC CGTCGACGCG
CAGGCGTTGG AGATCGCCCG GCGGGCGGTG CCGGCCGAAT CGGGCCGCTC GTTCCCGGTG
CTGGGCCCGC CGCTGGACGG GATCGAGGTC GCCGTGCGGG GCCGCGACGG CGCGGTGCTC
GGCGACCGCG AGGTCGGGGT GCTGCACCTG CGCGGCGAGT GCATCACCGA GCAGTACCTG
ACCGTGGACG GGCCGGTGGC CACCCAGGAT GCCGACAAGT GGCTGGACAC TGGGGATCTC
GGCTACCTGG TGGACGGCGA GGTGGTGGTC TGCGGCCGGG TCAAGGACGT GATCATCATG
GGTGGGCGCA ACATCTACCC GACCGACATC GAGCGGGTGG CCCAGAGCAT CGACGGCGTT
CGAGCGGGTA ACGCGGTCGC GGTGCGGTGG ACGACGCCCA GCGGTCGCGA ATCGTTCGCG
GTGGCCGTCG AGTCCCGCGA GGCCGGTGAC CAGGACGCGG CCGAGCGCAT CCGGCAGGCC
GTGCGGTCGG CGGTGACCGC CGAGATCGGC GCCCGCCCGG CGACGGTGTC GGTGCTCCCG
GTCGGGAGTC TGCCCAAGAC TCCGTCCGGC AAGCTGCAGC GCTCCGCCGC GGCCCGGTTG
ATCACGCCAC CGCCGGCCGA GGCGCTGCCG GTTCGGCCCC CGGCGCCCGA GGGTCTGCCG
CTGCCCGGCT GA
|
|---|
| Protein sequence | MSAFSDALCT AAQGPTGMTT GEPHEPVRTS WADVHAKACA GARVLAAHGI GPGDAVAVLA
AKPFEVAPIA QAAWLAGASV TMLHQPTART NLMTYAQDTA AVLSLVGAKA AVLGDPFTEF
AELLDGSGVL ALTVDDLLAE PGGPAPDVEI GEDLPALLQL TSGSTSTPKA VRITHRNLWA
NIEAMCQAAQ IRPGEVMVSW LPLFHDMGMV GFLTLPMCRG IELVTVTPTD FLASPLIWPT
LISKYRGTIT AAPNFAFALT ARVLARPTTR ELGLDLSCMR FALNGAEPID VAAVRAFLAA
GAPFGLPETA VVCAYGMAEA SLAVSFHPWG TPLKVDTVDA QALEIARRAV PAESGRSFPV
LGPPLDGIEV AVRGRDGAVL GDREVGVLHL RGECITEQYL TVDGPVATQD ADKWLDTGDL
GYLVDGEVVV CGRVKDVIIM GGRNIYPTDI ERVAQSIDGV RAGNAVAVRW TTPSGRESFA
VAVESREAGD QDAAERIRQA VRSAVTAEIG ARPATVSVLP VGSLPKTPSG KLQRSAAARL
ITPPPAEALP VRPPAPEGLP LPG
|
|---|
| |