Gene Namu_4407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4407 
Symbol 
ID8450033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4892024 
End bp4893502 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content73% 
IMG OID645043454 
Producthistidine kinase 
Protein accessionYP_003203683 
Protein GI258654527 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTACCC CGCGTCGCCG GTGGACGTTG CGGGCCCGGC TGATCGCGCT GGTCGTGGCG 
ACCGCGGCGG TCGCCCTGGT CGCGGTGGAC ATCGTGCTGC CGCTGATCAT GCGCGACGCG
GCGATCAGCA CCAAGGACGC CACCCTGTCG GCGGCCACCG CGGCCGCGCA GAAGGAGTAC
GGCCGGCTGA CCGGCGAGAT CCTGGCCGAC CTGACCAGCG GGTCGGGCCT CAAGGGCGAG
GTCGGCTGGT CCACGATCAC CCAGTCCGGG ATCACCCAGG TGCTGGTCCA GGCGGCCAGC
GACGAGGACG CCAATCCCGA TCTGACCTCG GCGGAGTGGC TCAACGCCGC GGCCACCGTC
GGCGATGCCA CTCACGGCGA CCTGCGGTAC CGGGCGATGG GCTTCGGTGG CGTCATCGTC
AACGGCCAAC CCGGCTACCT GGTGGCCTGG ATCCCGATGG CCGACCTGGA CGAGCAGCTG
CGCCGGCTCA TCCTGGCCGA GCTGCTGATC ACCGCCGGGC TGCTGGTGCT GTTGGGTGCC
ACCGCCAGCC TGGTGATCCG GCGGGAGATG CGGCCGCTGG AGTCGATGGC CACGGCCGCC
GACGCCATCG CCCAGGGCGA TCTGAGCCGG CGGGTGCAGG AGTCCGATCC CGGCACCGAG
ATCGGCCGGC TCGGGTTCGC CTTCAACGAC ATGCTGGACG GCATCTCCTC CCTGCTGGAC
GAGCGCCGGC GCAACGAGGA CAAGCTGCGC CGATTCATCG CCGACGCCTC GCACGAGCTG
CGCACCCCGG TGGCCGCCGT GCGTGGCTAC ACCGACCTGT ATCAGGCCGG AGCGCTCCCG
GACGAGAGCG CGGTCGACCG GGCGATGCAG CGGATGGGTT TCGAGGCCCG GCGGATGGGC
GCGCTGGTCG ACGACCTGCT CACCCTGATC CAGGCCGACG CGGAGAACGC GGTCGGGCAC
GAGCTGGTCG ACCTGAACGA GCTGCTCACC GGGGTGGTCG ACGACGCCGC GGTGATCGAC
CCGACCCGGA TCTGGCGGTT GGCGGCCAGC AACGGCGGCG TGGACGTGTT CGGCGACCGG
CTGCGGCTGC ACCAGGTGTT CGCCAACCTG CTGTCCAACA TCCGCACGCA CACCGCGGAG
GGGACGGTGG CCACCGTCTC CGTGCTGCCC GGCCTGGACG AGATCGCGGT CAGCGTGAGC
GACGACGGGC CCGGGGTGAG CGACGAGGAC CTGGACCGCC TGTTCGACCG GTTCTACCGG
GTCGACCCGT CGCGCAGCCG CGAACGCGGC GGCACCGGGC TCGGCCTGTC CATCGTGGCG
GCGATCGTGC GCGGCCACGG CGGCCGGATC GCGGCCACCC ACACCCCCGG CGGGGGCCTG
ACCATCACGG TGGTGCTGCC CCGCGCGTCG GGGACCGCGG CGGTGCGCCC GGCCCGCCCG
GGCGGCCCCG CCGGTTCGGT TGACCTGCCC GAAACCTGA
 
Protein sequence
MGTPRRRWTL RARLIALVVA TAAVALVAVD IVLPLIMRDA AISTKDATLS AATAAAQKEY 
GRLTGEILAD LTSGSGLKGE VGWSTITQSG ITQVLVQAAS DEDANPDLTS AEWLNAAATV
GDATHGDLRY RAMGFGGVIV NGQPGYLVAW IPMADLDEQL RRLILAELLI TAGLLVLLGA
TASLVIRREM RPLESMATAA DAIAQGDLSR RVQESDPGTE IGRLGFAFND MLDGISSLLD
ERRRNEDKLR RFIADASHEL RTPVAAVRGY TDLYQAGALP DESAVDRAMQ RMGFEARRMG
ALVDDLLTLI QADAENAVGH ELVDLNELLT GVVDDAAVID PTRIWRLAAS NGGVDVFGDR
LRLHQVFANL LSNIRTHTAE GTVATVSVLP GLDEIAVSVS DDGPGVSDED LDRLFDRFYR
VDPSRSRERG GTGLGLSIVA AIVRGHGGRI AATHTPGGGL TITVVLPRAS GTAAVRPARP
GGPAGSVDLP ET