| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4299 |
|---|
| Symbol | |
|---|
| ID | 8449925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 4781305 |
|---|
| End bp | 4782207 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645043347 |
|---|
| Product | Dyp-type peroxidase family |
|---|
| Protein accession | YP_003203576 |
|---|
| Protein GI | 258654420 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2837] Predicted iron-dependent peroxidase |
|---|
| TIGRFAM ID | [TIGR01413] Dyp-type peroxidase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.193498 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC CGCAGACCGG CATCTTCGCC CTGGGCACGC ACGCCCATTC CTACCTGGAG
CTGACCCTGG AGCCGGGAGC GGACCCGCGG CAGGCGGTGG CCGTCGTGGC CGGGTTGAGC
GAGCCGCGGA CCACCATGGG CGGAGTCAAC CTGGTGGTGG GCTTTCGCCC GGAGCTGTGG
GAATCGGTCC TGCCCGGCCA CGCCCCGGCC GGGCTCACCG GTTTCACCGC GCCGGTCACC
GGGCCCGACG GCTTCACCAT GCCGGCCACC CAACGCGACC TCTTCCTGTG GACGGCCGGG
GGCTCGCGCG ACGTCGTCTT CGACACCGTC ACCGCCGTCA TCGAGGCGCT GGCCGGCCTG
GCCACGGTGA CCGATGAGGT ATCCGGCTGG ACCTATCACC GCGACCGGGA CCTGACCGGG
TTCATCGACG GCACCGAGAA CCCGCACCTG TCGGAGGCGG CCCGCCGGGT CCTGGTGCCG
TTCGGCCGGC CCGGCGGGGG CGGCTCGGTG CTGCTGGTGC AGAAGTGGCG GCACGAGGCC
GCGCGCTGGA ACGCGTTGCC GGTGGCCGAC CAGGAGCAGG CGATCGGCCG GACCAAGCCG
GACAGCGTCG AGCTGACCGA TCGCCCGGAG ACCTCGCACG CGGCCCGCAC CGACCAGGAC
GACTTCGGCA AGATCTTCCG GCGCAACACC GCCTTCGGCG ACGCCCGCGA GCACGGCACC
ATGTTCGTCG GCTTCTGCAA CCGCCGGACG CCGCTGGCCG ACATGCTCGA AAGCATGGCC
GGCGTGCGCG GTGGTCTGCG CGACGAATTG ACCCGGTACA CGACCCCGCT GACCGGCGCC
TATTACTTCG TGCCCGCCCT GGACGACCTG GCGATCCTGG CGCCCCCGGA CGCCGAGGAC
TAG
|
|---|
| Protein sequence | MTTPQTGIFA LGTHAHSYLE LTLEPGADPR QAVAVVAGLS EPRTTMGGVN LVVGFRPELW
ESVLPGHAPA GLTGFTAPVT GPDGFTMPAT QRDLFLWTAG GSRDVVFDTV TAVIEALAGL
ATVTDEVSGW TYHRDRDLTG FIDGTENPHL SEAARRVLVP FGRPGGGGSV LLVQKWRHEA
ARWNALPVAD QEQAIGRTKP DSVELTDRPE TSHAARTDQD DFGKIFRRNT AFGDAREHGT
MFVGFCNRRT PLADMLESMA GVRGGLRDEL TRYTTPLTGA YYFVPALDDL AILAPPDAED
|
|---|
| |