| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4262 |
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| Symbol | |
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| ID | 8449888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4735754 |
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| End bp | 4738234 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 645043311 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_003203540 |
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| Protein GI | 258654384 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03550] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.296294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGTCT GGTCGACCCA CTCGTCCGCT GCACTCGGCT CAGCTGCCCT CGACTCGGTC
GGGCTCACCG GGGTGGCCGC GCGGGCGCTG GCCACCCTGC CCACGGATCA GCTGACCGCC
CGCGCGCGCG AGATCCGGGA CGCGTCGTTC GGCACCCGGA TCACGTTCTC GCCCAAGGTG
TTCCTGCCGC TGACCAGGCT GTGCGCGGAT CGCTGCGGGT ACTGCACGTT CGCCACCGCG
CCGCGCCACC TGCCGCACGC CTACCTCACC CCGGACGAGG TGCTGGCCGT CGCCGGGCAG
GGTGCCACCC ACGGCTGCGC CGAGGCCCTG TTCACCCTGG GGGAGGGGCC CGAGCGCCGG
TACCCGCAGG CCCGGGAGTG GCTCGACGAG CACGGCTACA CCTCGACGGT GGACTACCTG
GTGGCGATGG CCGGCCGGGT GCTGGGCGAG ACCGGCCTGT TGCCGCACGC CAACGCCGGC
GCCATCTCGG CGCCGGAGCT GGCTCGGCTG CGGACGGTCG CCCCCAGCCA GGGGATGATG
ATCGAATCGC TGCGGCCCGA CCTGGCCGCC CACCGCGGCG CTCCGGACAA GACCCCGGAA
CGTCGGCTGG CCACCCTGCG GGCCGCCGGC GAGCTGGCCA TCCCGTTCAC CACCGGCATC
CTGGTCGGCA TCGGGGAGAC CGAGGCCGAC CGGATCGAGG CCCTGCTGGC CATCGCCGAC
GTGCATCGCG AGTTCGGGCA CATCCAGGAA GTGATCGTGC AGAACTTCCT GCCCAAACCG
GGCACGGCGA TGCGGGACGA GCCGCCGTGC CCGCCGCTGG AGCACCTGCG GGCGATCGCG
CTGGCCCGGC TGATCCTGCC GCCGGATGTG CATCTGCAGG CCCCGCCGAA CCTGACCGAC
ACCGAGCAGC TGGGCGAGCT GCTGGCCGCC GGCCTCGACG ACTGGGGCGG GGTGTCCCCG
GTGACCGCCG ACCACGTCAA TCCCGAACGC CCGTGGCCGG CCCTGCACAC CCTGCGGTCG
GCGACCGAGG ACGCCGGCCA CACGCTGGCC CCGCGGATGA CGATCTACCC GGAGTTCGCG
CTCGATCCGC AACGGTGGCT GGACCCGGCG ACCCGGTTCC CGGTGCTCGA CCGGTCCGAC
GCGCAGGGCC TGGGCCGGGA CGACCCGGGC GCGGTGTGGC CGGAGAAGCA CGGCGCCGCG
GCCAACGTCG GCACCGGTGC CGAGGTGATT CAGATCGGCC GCCGGTCCAC CGCCTGGTAC
TCGGGGGCGG ACGTGGCGCC GCCGGTGCTG ATCCCGGGGC CGGCGTTCGC CCGCGGCCGG
GTCGCCGAGG TGCTCGACGG GGCCCGGGCC GGGCAGGAGC TGGGCGAGGC CGAGATCGTC
GCCCTGTTCG GGGCCCGGGG CCCGGAGGTC GCCGCGGTCG CCGAGCTGGC CGACGAGCTG
CGCCGCGAGC TGGTCGGCGA CGAGGTCACC TACGTGATCA ACCGGAACAT CAACTACACC
AACGTGTGCA CGTTCCGGTG CACGTTCTGC GGGTTCTCCA AGGGGCCGCT CTCGCTCAAC
CTGCGGGGCA AGCCGTACCT GCTCTCGCTG GAGGACATCG CGCAGCGCTC CCGGGAGGCG
GTCGACCTCG GGGCCACCGA GGTCTGCCTG CAGGGCGGCA TCCACCCGCA CTTCGACGGC
AACTTCTACG TCGACGTCGC CCAGGCAGTG CACGACGCGG TGCCCGACCT GCACATCCAC
GGCTTCACCG CGCTGGAGGT GCACGAGGGG GCCAAGCGGC TGGGCGAGCC GCTGACCGAC
TACCTGCGCC GGCTGCAGGC CGCCGGCCTG AAAACCCTGC CGGGCACCGC CGCGGAGATC
CTGGACGACG AGATCCGGCG GGTCATCTGC CCGGACAAGA TCACCACCGA CGAGTGGCTC
GAGGTGCACC GGGCCGCGCA CTCGGTCGGC CTGCGCAGCA ACGTCACCAT CATGTTCGGC
TCGGTCGAGC AGCCGCAGCA CTGGGCCCGG CACCTGCTGC GGACCCGGGC GCTGCAGCGG
GAGACCGGCG GGTTCACCGA GTTCGTGCCG CTGCCGTTCG TGCACATGGC CGCCCCGATC
TACCTCAAGC GGGGGGCCCG GCGCGGGCCG ACCTGGCGCG AGGCGGTCCT GATGCACGCG
GTCGGCCGCA TCGTCTACGC CGGCACCATC GACAACATCC AGGCGTCCTG GGTCAAGCAG
GGTCCGATCG GCGCCCGCCA GTTGCTGCGG GCCGGCGTGA ACGACCTGGG CGGCACGCTG
ATGGAGGAGA ACATCTCCCG GGCCGCCGGG GCCAGCCACG GCCAGGGCCT GGACGCCGCC
GGGCTGCGCG CGCTGGCCGC GGCCGAGGGC CGGCCGGCCG TGCAACGGAC CACCTTGTAC
GGGCGCGTCC CCGCCGGCCT GGCCACTGCC GCCGGATCGG TGACCGCCGC GCCGCAGGAC
TCGGCGCCGG TCTCGGCCTG A
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| Protein sequence | MTVWSTHSSA ALGSAALDSV GLTGVAARAL ATLPTDQLTA RAREIRDASF GTRITFSPKV
FLPLTRLCAD RCGYCTFATA PRHLPHAYLT PDEVLAVAGQ GATHGCAEAL FTLGEGPERR
YPQAREWLDE HGYTSTVDYL VAMAGRVLGE TGLLPHANAG AISAPELARL RTVAPSQGMM
IESLRPDLAA HRGAPDKTPE RRLATLRAAG ELAIPFTTGI LVGIGETEAD RIEALLAIAD
VHREFGHIQE VIVQNFLPKP GTAMRDEPPC PPLEHLRAIA LARLILPPDV HLQAPPNLTD
TEQLGELLAA GLDDWGGVSP VTADHVNPER PWPALHTLRS ATEDAGHTLA PRMTIYPEFA
LDPQRWLDPA TRFPVLDRSD AQGLGRDDPG AVWPEKHGAA ANVGTGAEVI QIGRRSTAWY
SGADVAPPVL IPGPAFARGR VAEVLDGARA GQELGEAEIV ALFGARGPEV AAVAELADEL
RRELVGDEVT YVINRNINYT NVCTFRCTFC GFSKGPLSLN LRGKPYLLSL EDIAQRSREA
VDLGATEVCL QGGIHPHFDG NFYVDVAQAV HDAVPDLHIH GFTALEVHEG AKRLGEPLTD
YLRRLQAAGL KTLPGTAAEI LDDEIRRVIC PDKITTDEWL EVHRAAHSVG LRSNVTIMFG
SVEQPQHWAR HLLRTRALQR ETGGFTEFVP LPFVHMAAPI YLKRGARRGP TWREAVLMHA
VGRIVYAGTI DNIQASWVKQ GPIGARQLLR AGVNDLGGTL MEENISRAAG ASHGQGLDAA
GLRALAAAEG RPAVQRTTLY GRVPAGLATA AGSVTAAPQD SAPVSA
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