| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4139 |
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| Symbol | |
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| ID | 8449765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4575205 |
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| End bp | 4576920 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645043188 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_003203417 |
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| Protein GI | 258654261 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000025754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000138599 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGTCG CCCCGTATGA GCTGGTCCAT CAACCGCGGG AGGTGGTGGC GCGGGTGCGT
GCTCGTGGTC GCCTGGTGTT GTCCTCGCCG ACGATTAATC GGGGGACGGC GTTCACGTTG
GCGCAGCGGG AGCAGTTGGA GTTGACGGGG TTGTTGCCGA CGGGGGTGTC GACGTTGGAG
GGTCAGGTTC GGCGGGTGTG GGCGCAGTAT TTGCAGCAGC CGTCGGATTT GGCGAAGTGG
GTGTATTTGG CGAATTTGCG GGATCGTAAC GAGGTGTTGT TCTACCGGTT GTTGTCGGAG
CATTTGCCGG AGATGTTGCC GGTGGTGTAT ACGCCGACGG TGGGGACGGC GATCGAGCGG
TTCAGTCATG AGTTCCGGCG TAGTCGGGGT GTGTTTTTGT CGGTGGATCA TCCGGATCAG
GTGGAGACCG CGTTGCGGAA CACTGGTTTG GGTCCGGATG ATGTTGATTT GTTGGTCGCG
ACGGATTCCG AGGGGATTTT GGGGATCGGT GATCAGGGGA TCGGTGGTAT TGAGATCTCG
ATCGGGAAGT TGTCGGTGTA TACGGCGGCG GCGGGGATTC ATCCGCGGCG GGTGTTGCCG
GTGGTGTTGG ACATGGGTAC CGATAATTTG CGGTTGTTGA ATGATTCGAT GTATTTGGGT
GAGCGGCATG CGCGGGTGCG GGATCATCGG TATGACGAGT TGATCGATGC GTATGTGACG
GCGTGTAACA AGTTGTTCCC GAACGCGATG TTGCATTGGG AGGATTTCGG GACGGAGAAC
GCCCGCCGGA TTCTGAACAA GTATTCGGGG GTGTGTTGCA CGTTCAATGA TGATATGCAG
GGCACGGCGG CGGTGGTGTT GGCGGCGGTG TTCTCGGCGG TGCGGGCGGC GGGGTCGCGG
TTGGCTGATC AGCGGATCGT GATCCATGGG GCGGGTACGG CCGGGTTGGG GATCGCGGAC
ATGTTGCGGG ATCAGATGAT CCGGGAGGGG TTGTCGCCGG CGGAGGCGAC GGGCCGGTTC
TATGCGTTGG CCAAGCAGGG GTTGTTGGTT GATGACGATC CGTCGTTGTT GGATTTCCAG
GTGCCGTATG CGCGCTCGCG CGCCGAGGTG GCGGGGTGGC CGGCGGGTGC GGGTGGGGTC
GGGTTGGCCA CGGTGGTGTC GCGGGCGCGG CCGACGATTT TGATCGGGAC GTCGACGCAG
GCGGGGGCGT TCACGGAGTC GATCGTGCGG GAGATGGCTT CGTTCAATGC GCGGCCGATC
ATTTTGCCGT TGTCGAATCC GACGAGTAAG GCCGAGGCGT TGCCGCAGGA TCTGATCCAT
TGGACGGACG GGAAGGTGTT GACCGCGACG GGTAGTCCGT TCGAGCCGGT GCATTACAAG
GGGGTGGCGT ATCAGATTGC GCAGTCGAAC AATGCGTTGG TGTTTCCCGG GTTGGGGTTG
GGGGTGGCGG TGACGAAGGC GTCGCGGATC AGTGAGGGGA TGATCGCGGC GGCGGCGGAT
GCGGTGGCGG CGATGTCGGA TGCGCGCACG CCGGGGGCGA GTTTGTTGCC GCCGATGACG
GTGTTGCGGA CGGCGTCGGC GGCGGTGGCG ATCGCGGTGG CGAAGGCGGC CGATGCCGAG
GGGTTGGCGC GGGTGGAGCT GAGTAATCCG GTGCAGCAGG TGTATGACGC GATGTGGCAG
CCGGAGTATC CGCGGATCGA GCCGATCGAG GCCTGA
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| Protein sequence | MAVAPYELVH QPREVVARVR ARGRLVLSSP TINRGTAFTL AQREQLELTG LLPTGVSTLE
GQVRRVWAQY LQQPSDLAKW VYLANLRDRN EVLFYRLLSE HLPEMLPVVY TPTVGTAIER
FSHEFRRSRG VFLSVDHPDQ VETALRNTGL GPDDVDLLVA TDSEGILGIG DQGIGGIEIS
IGKLSVYTAA AGIHPRRVLP VVLDMGTDNL RLLNDSMYLG ERHARVRDHR YDELIDAYVT
ACNKLFPNAM LHWEDFGTEN ARRILNKYSG VCCTFNDDMQ GTAAVVLAAV FSAVRAAGSR
LADQRIVIHG AGTAGLGIAD MLRDQMIREG LSPAEATGRF YALAKQGLLV DDDPSLLDFQ
VPYARSRAEV AGWPAGAGGV GLATVVSRAR PTILIGTSTQ AGAFTESIVR EMASFNARPI
ILPLSNPTSK AEALPQDLIH WTDGKVLTAT GSPFEPVHYK GVAYQIAQSN NALVFPGLGL
GVAVTKASRI SEGMIAAAAD AVAAMSDART PGASLLPPMT VLRTASAAVA IAVAKAADAE
GLARVELSNP VQQVYDAMWQ PEYPRIEPIE A
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