| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4035 |
|---|
| Symbol | |
|---|
| ID | 8449654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 4449018 |
|---|
| End bp | 4451057 |
|---|
| Gene Length | 2040 bp |
|---|
| Protein Length | 679 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 645043080 |
|---|
| Product | ATP-dependent DNA helicase, RecQ family |
|---|
| Protein accession | YP_003203316 |
|---|
| Protein GI | 258654160 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0514] Superfamily II DNA helicase |
|---|
| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.000527005 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0486665 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCCCGG CCGCCGACGT CCTGGCCCGG GTGATCGCCG CCGCCGCCGG ACCGCAGGCG
CGCCCGCGCG AGGATCAGGT GCGCGCGGTG GGCGAGCTGG TCGAGCGGCG CCGCCGGGTG
CTGGTCGTGC AGGCCACCGG GTGGGGCAAG TCGGCGGTCT ACTGGGGCGC GACGGCCGCC
CTGCGCGGAC GCGGAGCCGG ACCCACCCTG GTCGTCTCGC CCCTGCTGGC GCTGATGCGC
GATCAGATCG CGGCGGCCGA ACGGGCCGGG CTGCGGGCGG CCACCATCAA CTCGACCAAC
GTCGACGAGT GGACGCAGGT GCTCGACGAG CTGCGCGCGG ACCGGCTCGA CCTGCTGCTG
GTCTCCCCCG AGCGGCTGGC CAACCCGCGG TTCGCCGCCC AGCTGCCGGA CCTGCTGGCC
CGGTGCGGGC TGCTGGTGAT CGACGAGGCG CACTGTGTGT CCGACTGGGG GTTCGACTTC
CGGCCGGACT ACCAGCGGCT GACCCGGATC CTGCTGCGGC TGTCCCCGGA CACCCCGGTG
CTGGCCACGA CGGCGACCGC GAACGAGCGG GTGACGGCCG ATGTCGCCGC CCAGCTCGGG
CCGGACACGG TGACGCTGCG CGGCTCGCTG GCCCGGGCCT CGTTGGGGCT CTCGGTGGTG
CCCGGGTTGA GCACGCTGGA GGGGTACGCC TGGGTCGCCG ACGCGCTGGC CACCATGCCC
GGCTCGGGCA TCGTCTACGT GCTGACCGTT GCCGAGACCG AGCGACTGGC CGGGTTCCTG
CGCGAGCGGG GCTTCGACGT GGCCGCCTAC TCGGGCCAGA CCCAGAACCG GGAGGAGCTG
GAGGACCGGC TGCGGGCCAA CGACGTCAAG GCGCTGGTCG CGACGTCGGC CCTGGGCATG
GGCTACGACA AGCCCGACCT GGCGTTCTGC CTGCACCTGG GCTCGCCGTC GTCCCCGGTC
GCCTACTACC AGCAGGTCGG CCGGGCCGGC CGGGCGCTGG ACACCGCGGT CGCCGTGCTC
GTGCCGGGCC CGTCCGACGA GCGGATCTGG GAGTACTTCG CCACCGCCGG CATCCCCACC
GACGAGCAGG TGCGGCGGGT GCTGGGGGTG CTGGACGAGG GCCCACAGAG CCTGCCCGCG
ATCGAGGCGG CCACCGGGAT CCGGCGCGGG CGGCTGGAGA CGCTGCTCAA GATCCTGGCC
GTGGACGACG TCGTCGCCCG CGACCCGGCC GGCTGGCGGG AGGGCGAGCA GCCCTGGGTC
TACGACGAGG CCAAGTGGTC GGCGCTGCGC CGGGTGCGCT CGGCCGAGGC CGACCTGATG
CGCCGGTACG CGCACGGGCA GGGCTGCCTG ATGCAGTTCC TGCAGCAGGC CCTGGACGAT
CCCGATCCGC ACCCGTGCGG GCGGTGCTCG GTGTGCACCG GGGAGCTGCC CGCGCCCGGC
GCCCGCCCGG ACCCGGAGAC GATCAGCGCC GCCCAGCGGT TCTTCCGCGG GCAGGACGTC
GTCGTCGAAC CGCGCAAGTT GTGGCCCAGC GGCCTGCCCG GCCGCAAGGG CAAGATCGCC
GGCCTGCGGG CCGGCCGGGC GTTGGCCTTC GCCGACGACC CGGCCTGGTC GCAGGTGCTG
GCCACGTTGT GGCAGCACGA CGCCCCGGCC CCGGCCGAGG TGCTGGACGG GATGGTCGAG
GCGCTGCGGC GGTGGTCGCG GTCCTGGGAC CGACCGACGG CGGTGGTGCC GATGCCGTCC
CGCCGGTACC CGCAGCTGGT CGGCTCGGTC GCCGAGCACC TGGCCCGGAT CGGCCGGCTC
CCGCTGGTGC CGGCCCTCGA GGTCACCGGT CCCCCGCCGT CGGCCGAGGT GTCCTCGGCG
GTTCGGGTCC GGGAGTTGCT GGCCCGTACC GCGCTGCGGC CGGGCGTCGA ACTCGACGGG
CCCGTGTTGC TCGTCGACGA CGTCATCCGG ACGCGGTGGA CGGTGACGGT GGCCTCGGCC
CTGCTGGTCC AGGCCGGCGC CGCCGCCGTG CTGCCGCTGG CCGTGCACCA GCTGCCCTGA
|
|---|
| Protein sequence | MLPAADVLAR VIAAAAGPQA RPREDQVRAV GELVERRRRV LVVQATGWGK SAVYWGATAA
LRGRGAGPTL VVSPLLALMR DQIAAAERAG LRAATINSTN VDEWTQVLDE LRADRLDLLL
VSPERLANPR FAAQLPDLLA RCGLLVIDEA HCVSDWGFDF RPDYQRLTRI LLRLSPDTPV
LATTATANER VTADVAAQLG PDTVTLRGSL ARASLGLSVV PGLSTLEGYA WVADALATMP
GSGIVYVLTV AETERLAGFL RERGFDVAAY SGQTQNREEL EDRLRANDVK ALVATSALGM
GYDKPDLAFC LHLGSPSSPV AYYQQVGRAG RALDTAVAVL VPGPSDERIW EYFATAGIPT
DEQVRRVLGV LDEGPQSLPA IEAATGIRRG RLETLLKILA VDDVVARDPA GWREGEQPWV
YDEAKWSALR RVRSAEADLM RRYAHGQGCL MQFLQQALDD PDPHPCGRCS VCTGELPAPG
ARPDPETISA AQRFFRGQDV VVEPRKLWPS GLPGRKGKIA GLRAGRALAF ADDPAWSQVL
ATLWQHDAPA PAEVLDGMVE ALRRWSRSWD RPTAVVPMPS RRYPQLVGSV AEHLARIGRL
PLVPALEVTG PPPSAEVSSA VRVRELLART ALRPGVELDG PVLLVDDVIR TRWTVTVASA
LLVQAGAAAV LPLAVHQLP
|
|---|
| |