Gene Namu_3974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3974 
Symbol 
ID8449593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4387213 
End bp4388103 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content71% 
IMG OID645043019 
Productdeoxyribose-phosphate aldolase/phospho-2-dehydro- 3-deoxyheptonate aldolase 
Protein accessionYP_003203255 
Protein GI258654099 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3684] Tagatose-1,6-bisphosphate aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00258196 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0292839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCC TGACCACCCT GGAACGCCGC GGCATGAGCT CGATCTCCAC GCCCGGCGGC 
CGCATGCTGA TCGTCGCCGC CGATCAGCGC AACGGCATGA AGGCCGCCAT GACCGACGCC
CCCAACGGGG CCAAGGGCAT CAGCACCGCC GAACTCGCGG CGGCCAAGTC CGATCTGGTG
CAGTACCTGG CCAACCACGC GCCGGCCATC CTGCTCGATC CGGAGGTCGC GCTGCCGGCG
ATCGTCGACG AGGGCACCCT GGGTCGCAAC ACCGCCCTGG TCGTCGGGAT GGACGCCTCC
GGCTTCGAGA CGGTCGACGG GCTGCGCTAC ACCCGTTACG TCGACGGCGT GACCCCGCGA
CGGGTCCGCG AGCTCGGCGG TGACGTCGCC AAGATGCTCT TCTACACCCG GCCCGACAAG
CAGGGCCTCA CCTCCGTGGT GGCCGACCAG ATCCGCGAGC TGGTCGCCGC GTGCTCGGCC
GAGGGGCTGC TGCTGATCGT CGAGCTGCTG ACCTACCAGC TCGAGGACGA GTCCGACGAG
GACTACCGCG CCGCCTTCGG CACGCTCGTC GTCGACGGCG CCAAGCTGGC CGTCGAGTGC
GGGGCCAAGG TGCTCAAGCT GCAGTACCCG GGCTCGGCGC AGGCCTGCCA GGCGGTGACC
GCGGCCGCCG ACGGCGTGCC GTGGGCGGTG CTGTCGGCCG GGGTCGATCA CGAGACCTTC
ATCGAGCAGG TCGCGATCGC CATGGCCAAC GGGGCCAGCG GCGCGATGGC CGGCCGGTCC
CTGTGGAAGG ACAGCCTGTC GATCTCGTCC GCCACCCGGC AGGACTACCT GACCAACCGG
GCCTTGCCGC GGTTGCGCGA GCTCAACGCG GTCATCGACG CGGCGAACTG A
 
Protein sequence
MNTLTTLERR GMSSISTPGG RMLIVAADQR NGMKAAMTDA PNGAKGISTA ELAAAKSDLV 
QYLANHAPAI LLDPEVALPA IVDEGTLGRN TALVVGMDAS GFETVDGLRY TRYVDGVTPR
RVRELGGDVA KMLFYTRPDK QGLTSVVADQ IRELVAACSA EGLLLIVELL TYQLEDESDE
DYRAAFGTLV VDGAKLAVEC GAKVLKLQYP GSAQACQAVT AAADGVPWAV LSAGVDHETF
IEQVAIAMAN GASGAMAGRS LWKDSLSISS ATRQDYLTNR ALPRLRELNA VIDAAN