| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3852 |
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| Symbol | |
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| ID | 8449471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4223836 |
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| End bp | 4225176 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 645042901 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003203137 |
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| Protein GI | 258653981 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00000421805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.905597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGGAT CCGCGGTCGT GAACCCGCGC GCCCAGTACT CCGGTTGGGT CTCGCCCCTG
TGCTGGATTG CCGTCGCCCT CGAAGGATTT GACCTGGTCG TGCTGGGGGT GGTGTTGCCC
GCGCTGCTCA AGTACGACGA CTGGGGGCTC AACCCCAATT CAGCCTCGGT GATCTCGGTC
GTCGGCCTGG TCGGCGTGAT GGTCGGGGCG TTGGCCGCCG GCACGGTCAG CGACCTGATC
GGCCGCCGCC GCACCATGCT GTGGACGGTG ATCAGCTTCT CCGTGCTGAC CCTGGCCTGC
GCCTTCGCCC CCGACCCAGT CACCTTCGCG GTGCTGCGCT TCCTGGCCGG TCTCGGCCTG
GGCGGCGTGC TGCCCACCGC GTTGGCGCTG ATCAACGAGT ACGCCCGGTC GGGTCGCGGC
GGGCGGGCCA CCACCACCAT GATGACCGGC TACCACGTGG GCGCGGTGCT GACCGCGCTG
CTGGGCATCC TGATCATCGA GCCCTGGGGC TGGCATGCGA TGTTCATCGT CGGCGCCCTG
CCGGCCATCG TGCTGGTCCC GTTGATGATC AAGTACCTGC CCGAGTCGAA CGCCTTCCTG
CAGGCCCGAG CCGGGCTCGC GCCGAGCGCC GGCAAGGCCA CCACGACGGA CCGGGCCGAC
CAGGCGGCCA AGCCGGCCAA GCCGGCCAAG TCCAAGAACC CGGTCGGCAT GCTGTTCCAC
CACGGTCTGG GCCGGTCCAC GGTGGCGTTC TGGGTCGCCT CGTTCATGGG CCTGCTGCTG
GTGTACGGGC TGAACACCTG GCTGCCGCAG ATCATGCGCG AGGCCGGCTA CGAGCTGGGC
GCCGCGCTGG CCCTGTTGCT CGTACTCAAC GTCGGCGCGG TGCTCGGCCT GCTGGTCGCC
GGGCAGGTCG CCGACAAGAT CGGCACCCGT CGCTCGTCGA TCAGCTGGTT CGCCGTGGCC
GCCCTGTTCC TGGCCCTGCT GTCGATCAAG CTGCCCGGCA TCGGGGTGTA CATCAGCGTG
CTGCTGGCCG GCATGTTCGT GTTCAGCGCG CAGGTGCTGG TCTACGCCTA CGTCGCCCAT
GTCTACCCGG CCGCCGCCCG CGGCACCGCG CTGGGCTCCG CGGCCGGCGT CGGCCGGCTG
GGCGCCATCA CCGGCCCGCT GATCACCGGC GTCATGCTGA CCGCCGGGGT GGCCTACCCG
TGGGGCTTCT ACCTGTTCGC GGCGGTCGCC GCGATCGGTG CCGCGGCCAT CTTCCTGGTC
GATCGGAACC CGGCCCCGGC CGAGCCGCTG CCGGTCACCG AACAGCAGGC CGACCAGATC
ACCCACATCC ACCCGCACTG A
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| Protein sequence | MNGSAVVNPR AQYSGWVSPL CWIAVALEGF DLVVLGVVLP ALLKYDDWGL NPNSASVISV
VGLVGVMVGA LAAGTVSDLI GRRRTMLWTV ISFSVLTLAC AFAPDPVTFA VLRFLAGLGL
GGVLPTALAL INEYARSGRG GRATTTMMTG YHVGAVLTAL LGILIIEPWG WHAMFIVGAL
PAIVLVPLMI KYLPESNAFL QARAGLAPSA GKATTTDRAD QAAKPAKPAK SKNPVGMLFH
HGLGRSTVAF WVASFMGLLL VYGLNTWLPQ IMREAGYELG AALALLLVLN VGAVLGLLVA
GQVADKIGTR RSSISWFAVA ALFLALLSIK LPGIGVYISV LLAGMFVFSA QVLVYAYVAH
VYPAAARGTA LGSAAGVGRL GAITGPLITG VMLTAGVAYP WGFYLFAAVA AIGAAAIFLV
DRNPAPAEPL PVTEQQADQI THIHPH
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