| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3844 |
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| Symbol | |
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| ID | 8449463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 4215368 |
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| End bp | 4216141 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 645042893 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003203129 |
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| Protein GI | 258653973 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.0315057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.582541 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGG GCATTGCCGG CAAGGCGGCG CTGGTGTGCG CGTCGACCAG CGGTTTGGGC
GCCGCGACCG CCCAGGCGTT GGCCGCCGAG GGCAGCCGGG TGGTCTTCGC CGGTCGCCGG
TCCGAGCTGG CCCGGGAGCT GGCCGGCCGG TATCCCGGTT GTGTCGGCCT GGCCGCCGAC
CTGTCCACCG TGGCCGGGGC GCAGGCCCTG CACGACGCGG CCGTACGGGC CGTCGGCCCG
TTGGACATCG TCGTGCTCAA CAGCCCGCCG CCGCCCCCGG GCACCGCGGT CGACCTGGAC
CCGCCGGCCC TGACCGAATC GCTGGCCTCC TTGCTGCTGG CGCCGACCGC GCTGGTCGGC
GCCGCGCTGC CGCACCTGCG CCAGCAACGC TGGGGGCGGA TCCTGGCCAT CGGATCGAGC
AGCGTGCAGG CGCCCATCCC CGGGCTGGCC GCCTCGAACA CCGGCCGGGC CGCGCTGGCC
GGGTACCTCA AGACGCTGGC CGGCGAGGTG GCCGCGGACG GGATCACGGT GAACCTGCTG
CTGCCGGGAC GCATCGCCAC CGACCGAATG CGCTCGCTGG ACGAGACGGT GGCCCGGGCC
AGCGGCCGCC CGACCGCCGA GGTGGCCGCG GAGTCGCTGC GCCTGATCCC GGCCGGGCGC
CTGGGCGACC CGGCCGAGTT CGGCGCGGTG GCCGCCTTCC TGTGCGGTGA GCCGGCGGCC
TACGTCACCG GGACCGCGGT GCGCTGCGAC GGCGGGCTGA TCCCGACCCT GTGA
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| Protein sequence | MDLGIAGKAA LVCASTSGLG AATAQALAAE GSRVVFAGRR SELARELAGR YPGCVGLAAD
LSTVAGAQAL HDAAVRAVGP LDIVVLNSPP PPPGTAVDLD PPALTESLAS LLLAPTALVG
AALPHLRQQR WGRILAIGSS SVQAPIPGLA ASNTGRAALA GYLKTLAGEV AADGITVNLL
LPGRIATDRM RSLDETVARA SGRPTAEVAA ESLRLIPAGR LGDPAEFGAV AAFLCGEPAA
YVTGTAVRCD GGLIPTL
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