Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3778 |
Symbol | |
ID | 8449397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 4145592 |
End bp | 4146485 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 645042829 |
Product | PfkB domain protein |
Protein accession | YP_003203065 |
Protein GI | 258653909 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.00891877 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.801682 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCGG CGCCGCCCCC ACGGGTGACC GTGGTCGGCG ACGTCGGCCT CGACGTGCGG TGCCGGCTGA CCGCGGCCCT GGCCCCCGGC GACGACACCC CGGCCCGGAT CACCGCCCAC CCCGGCGGGG CCGGCGGCAA CACCGCGGCC TGGCTGGCCG ACCTGGGGGT CCGGGTCGAG CTGATCGCCC GGGTCGGCGA CGACGAAGCC GGCCGGACGG CCGCCACCGA ACTGGGGGCC CGCGGGGTGG GCTGCCGGTT CGTCGTCGAC CCGCAGCATC CGACCTGCCG GGTCGTGGTC CTGCTCGGTC CGGACGGCGA TCGGACGATG GTCTCCGACC GGGGCGCCAA TGCCGCGCTG CATCCGGACG ACATCCGGCT GACCGACCCC GGGGCCCCCG GCCACCTGCA CCTGTCCGGC TACGTGCTGC TGGACGAGGC CTCCCGCCCG GCCGGACGGG CCGCGCTGGC CCGGGCCGCC GCGGCCGGCT GGAGCACCTC GGTGGACCCG CAGACCGCGG CCGGCCTGAG CGCGGTGGGC GCGGACACTT TTCTGGAGTG GGTGCGCGGC GTCGATCTGC TCCTGCCCAA CGACACCGAA CTGGCCGCCC TGGGCGGGCC GGCCGCGGCC CTGGCCGTGG TCCGGGCGGT GGCGGTCACC CACGGCCGGC AGGGGGCGAC CTGGTTCGCC GGCACCGAGC AGCGGCGCGC GGTGGTCGAG CGGGTCGACG ACACCGACAG CACCGGCGGC GGTGACGCGT TCAACGCGGG CTTCCTGGCC GCCTGGCTGG ACGGGGCGGA GCCGGGCGCG GCGCTGGCCG CCGGGGTCCG CGCCGGAACC AGGGTGGCCG GTGCGGCCGG TGCCCGGCCG GTCCTGGACG GGCCGGCCGG CTGA
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Protein sequence | MSAAPPPRVT VVGDVGLDVR CRLTAALAPG DDTPARITAH PGGAGGNTAA WLADLGVRVE LIARVGDDEA GRTAATELGA RGVGCRFVVD PQHPTCRVVV LLGPDGDRTM VSDRGANAAL HPDDIRLTDP GAPGHLHLSG YVLLDEASRP AGRAALARAA AAGWSTSVDP QTAAGLSAVG ADTFLEWVRG VDLLLPNDTE LAALGGPAAA LAVVRAVAVT HGRQGATWFA GTEQRRAVVE RVDDTDSTGG GDAFNAGFLA AWLDGAEPGA ALAAGVRAGT RVAGAAGARP VLDGPAG
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