Gene Namu_3770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3770 
Symbol 
ID8449389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4136952 
End bp4137971 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content67% 
IMG OID645042821 
Productcytochrome d ubiquinol oxidase, subunit II 
Protein accessionYP_003203057 
Protein GI258653901 
COG category[C] Energy production and conversion 
COG ID[COG1294] Cytochrome bd-type quinol oxidase, subunit 2 
TIGRFAM ID[TIGR00203] cytochrome d oxidase, subunit II (cydB) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0669054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.648347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCCTGA ACAACCTCTG GTTCGTCCTC ATCGCCATCC TGTGGATCGG ATACTTCGTC 
CTGGAAGGCT TCGACTTCGG CGTCGGCGCG CTGCTGCGCA TCGTCGGCAA GGACGAGAAG
GGCCGCCGGG TCCTGATCAA CACCATCGGC CCGGTCTGGG ACGCCAACGA GGTCTGGCTG
CTCACCGCGG GCGGCGCGAC CTTCGCCGCT TTCCCCGAGT GGTACGCCTC GATGTTCTCG
GGCTTCTACC TGGCCCTGGT GCTGATCCTG GTGCTGCTGA TCGTGCGCGG GGTGGCCTTC
GAGTACCGGG GCAAGGGGCA CAGCGATACC TGGCGGGCCC GCTGGGACCT GTCCATCCTG
GTCACCTCCT GGGGGCTGGC CCTGCTCTGG GGCGTTGCCT TCGGCAACGT GGTGCGCGGC
GTCGCGCTGA ACGCCGAGCA CGAGTACGTG GGCACCTTCC TGGACCTGCT CAACCCGTTC
GCGCTGCTGA TGGGCCTGAC CACGCTGCTG CTGTTCCTGA CCCACGGGTC GGTATACCTG
GCCCTGAAGA CCACCCAGGA GGTTCGGGAA CGGGCGCAGC GGCTGGCCGT CCGGCTCGGG
CCGGTCGCGC TCGTGGTGAT GGCCGTGGCC GTCGTCTGGC AGCAGTTCAT CCGGGGCACC
ACCGGCTCGG TCGTGCTGGG CGCGTTGGCC GTGGTCGCGA TGCTGGCGGC GGTGCTGTTG
ACGCGCGCCA ACCGCGACGG CTGGGCGTTC CTGGCCTCCG CGGTGTCCAC CGGGATGCTG
GTCACCGGCT GGTTCGCCTC GATCTACCCG GACGTGTTCC CCTCGACGAT CAACCCGGAC
TACTCGCTGA ACATCGAGAA CGCCGCGTCC ACCCCGTACA CGCTCACCGT GATGAGCTGG
ATCGCCCTGC TGTTCGTCCC GTTGATCCTG GGCTACCAGG CGTGGAGCTA CTGGATCTTC
CGCAAGCGGA TCTCGACCAA GCAGATCCCC GAGTCACCGA CCTCGGTGCC CAGCCATTGA
 
Protein sequence
MFLNNLWFVL IAILWIGYFV LEGFDFGVGA LLRIVGKDEK GRRVLINTIG PVWDANEVWL 
LTAGGATFAA FPEWYASMFS GFYLALVLIL VLLIVRGVAF EYRGKGHSDT WRARWDLSIL
VTSWGLALLW GVAFGNVVRG VALNAEHEYV GTFLDLLNPF ALLMGLTTLL LFLTHGSVYL
ALKTTQEVRE RAQRLAVRLG PVALVVMAVA VVWQQFIRGT TGSVVLGALA VVAMLAAVLL
TRANRDGWAF LASAVSTGML VTGWFASIYP DVFPSTINPD YSLNIENAAS TPYTLTVMSW
IALLFVPLIL GYQAWSYWIF RKRISTKQIP ESPTSVPSH