| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3752 |
|---|
| Symbol | |
|---|
| ID | 8449371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 4119058 |
|---|
| End bp | 4119774 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 645042803 |
|---|
| Product | glycerophosphoryl diester phosphodiesterase |
|---|
| Protein accession | YP_003203039 |
|---|
| Protein GI | 258653883 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.00938184 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.068906 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGTCG TCGTGGGACA TCGGGGGGCC AGCGCCCGCT GGCCGGAAAA CACGCTGTCG
TCGTTCCTGG CCGCCTGGCA CGCCGGCGTC ACCTGGGTCG AGGCGGACAC CCAACCCACC
GCGGACGGGG TGCCGGTCCT GCTGCACGAC CGGGACCTGA ACCGCACCAC CTCGGGACGC
GGCCCGGTCC GGGCGACCCG CCTGCGCGAC GTGCAGAAGC TGTCGGTGCG AGGTTGGCCC
GGGGACTGGG TACCGCGGCT GGCCGAGCTG CTGACCATGC TGACGCCGAC CCGGGCGCTG
CTGCTGGAGA TCAAGGGCTA CCACACCAGC CGGCAGATCC GGGCGGTGCT GGACGAGATC
GACCAGGCCG GCGTGGCCGA CCGGGTGCTG CTGCAGTCGT TCGAGGTGGA GGTGCTGCGC
GAGCTGCAGC GGGCGGTGCC CGACCGGCCC TACGGGCTGC TGGTCAGCTC CCTGGACGCG
GACCCGGTGG CCCGGTGCAG TGAGGTGGGG GCGGCGTACT ACAACCCCTC AGCGGGTGCG
GTGCTCGGCC GCCCGGGCGT GGTGCCGCAG CTGCATGAGG CCGGCATCGG GGTGGTCTGC
TGGACGGCCA ATGAACCCCG GGAGTGGGAC GCCCTGGCCG GTGCCGGCGT GGACGGGATC
ATCACCGACC GGCCGGCGGA GCTGCTGGCC CGGCAGCGGC GGGCGGCGCC GGCCTGA
|
|---|
| Protein sequence | MPVVVGHRGA SARWPENTLS SFLAAWHAGV TWVEADTQPT ADGVPVLLHD RDLNRTTSGR
GPVRATRLRD VQKLSVRGWP GDWVPRLAEL LTMLTPTRAL LLEIKGYHTS RQIRAVLDEI
DQAGVADRVL LQSFEVEVLR ELQRAVPDRP YGLLVSSLDA DPVARCSEVG AAYYNPSAGA
VLGRPGVVPQ LHEAGIGVVC WTANEPREWD ALAGAGVDGI ITDRPAELLA RQRRAAPA
|
|---|
| |