Gene Namu_3749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3749 
Symbol 
ID8449368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4114799 
End bp4116016 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content75% 
IMG OID645042800 
Producthistidine kinase 
Protein accessionYP_003203036 
Protein GI258653880 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0957761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0728761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCG CCCCTCCCGC CGCCGGTCCC GAGGGGCCGG CTCGCTCGAC GCGCCGCCGC 
GGCCCGATCG ACCAACGGCA GAGCCTGCGG CTGCGGCTGA CCCTGCTGTC CACCGCGTTG
CTGGCCCTGT TCGGCGCGCT CCTGCTGGCC CTGTCCTACC TGCTGGTCGG GCGGGTGGTG
GCGGCGCTGC CGCAGTTCCC GCCGGGGACC CTGGTGCAGG TCGGCGACCA GCTGATGGAC
GCCTCGACGG CCGCCGCCGA GATCGCCGGG CAGGGGCGGC AGACGGTGCT GGTGGTCGGC
CTGATCGCGT TCCCGATCCA GGTGCTGGCC GGCGCGCTGC TGTCCTGGCT GCTGATCGGG
CGGACGCTGC GCCCGCTGTT CACCCTGACC CGCACCGCCC GGGTGCTGTC CGAGTCGTCG
CTGGACCGGC GGATCCGGCT GTCCGGGCCG CGGGACGAGG TCGCCGACCT GGCCGACACC
TTCGACGAGA TGCTGGACCG GCTGCAGGCC GCGTTCGACG CCGAGCGCCG GTTCGTCGCC
AACGCCTCGC ACGAGCTGCG CACCCCGCTG TCGGTGATCC GCACCGAGGT CGAGGTGACC
CTGGCCGACC CTGAGGCCAG CGCCGCGGAC CTGCGCGAGA TGGGGGCGGT GGTGCTGGAG
GCCACCGACG GGGCCAACCG GCTGCTCACC TCGTTGCTGG TGCTGGCCCG GACCCAGGCG
CGGGGGGTCT CGGTGCTGCA GGTGGTCGAC TTCGCCGATC TGATCGCGCC GACCCTGCAG
GCCAACGAGT CGGCGATCGC CGAACGGGGC CTGTCGGTCT CGGTGCAGGC GGCCCCGGCG
CCGGTCTCCG GTGACCCGGC GCTGCTCGGC CGGCTGATCG GCAACCTGGT GGAGAACGCG
GTGCGGCACA ACGTGGCCGG CGGGTGGATC ACCGTGCGGA CCGAGCGCGA CGGCGGCGAG
TCGGTGCTGG AGGTCGCCTC CTGCGGGCCG GTGATCGACG AGCGCACCGT CGGCGAGCTG
TTCGAGCCGT TCCGGCAGGG GCGGCGGCCC CGAACCGGGC AGCGGGGGAC CGGCCTGGGC
CTGTCGATCG TGCGGGCCGT GGTCGCCGCC CACCACGGGT CGGTGGTGGC CGCACCGGTC
CCGGACGGCG GTTTGCGGGT GACCGTCCGG CTGCCCTTCG ACGACGGCAC GGGCCGTCCC
GACCGATCGG AGAGGTGA
 
Protein sequence
MSAAPPAAGP EGPARSTRRR GPIDQRQSLR LRLTLLSTAL LALFGALLLA LSYLLVGRVV 
AALPQFPPGT LVQVGDQLMD ASTAAAEIAG QGRQTVLVVG LIAFPIQVLA GALLSWLLIG
RTLRPLFTLT RTARVLSESS LDRRIRLSGP RDEVADLADT FDEMLDRLQA AFDAERRFVA
NASHELRTPL SVIRTEVEVT LADPEASAAD LREMGAVVLE ATDGANRLLT SLLVLARTQA
RGVSVLQVVD FADLIAPTLQ ANESAIAERG LSVSVQAAPA PVSGDPALLG RLIGNLVENA
VRHNVAGGWI TVRTERDGGE SVLEVASCGP VIDERTVGEL FEPFRQGRRP RTGQRGTGLG
LSIVRAVVAA HHGSVVAAPV PDGGLRVTVR LPFDDGTGRP DRSER