Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3716 |
Symbol | |
ID | 8449335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 4079012 |
End bp | 4079953 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645042773 |
Product | ABC transporter related |
Protein accession | YP_003203009 |
Protein GI | 258653853 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0016772 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.328535 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAG TGGAAAATCT CAGCAAGCGA TATGGGACCA AGCTCGCGGT GGACGGACTG AGTTTCGTGG TCCAACCGGG AATTGTCACC GGGTTCCTCG GCCCGAACGG CGCCGGGAAG TCCACCACGA TGCGGATGAT CGCCGGCCTG GACCAACCGA CCACCGGACG GGTCACCGTC AATGGTGGTG ACTACCGGTC CGCGGCTGCT CCGATGGCCG AACTCGGGGT GCTGCTCGAA GCCAAGGCGG TGCACACCGG CCGGTCGGCC CGCAACCACC TCCTCGCGTT GGCCCAGACG AACGGCATCA GCCGGCGCCG GGTGGACGAG GTGATCGACA TCGTCGGCCT GCAGCAGGTC GCCGGCAAAC GGGTCGGCGG GTTCTCCCTC GGCATGGGCC AACGGCTGGG GGTGGCCTCG GCATTGCTCG GCAACCCGCA GACCGTGCTC TTGGACGAAC CGGTCAACGG CCTGGACCCC GAAGGGGTGC TCTGGATGCG CACCATGCTC AAAGACCTCG CCGCCGACGG GCACACCGTC TTCGTCTCCT CCCACCTGAT GAGCGAAATG GCCCAAACCG CATCCCGTCT GGTGGTCGTC GGCCGCGGCA AGCTGATCGC CGACACCACC GTCGAGGAGT TCATCGCCCA GGCATCACAC CACGCCGTCA CCGTCCGCAC CCCCGAAACC ACCCGGCTGC GGGAGCTGCT CCTCGGCCCG GACGTCACCA TCACCACCGC GCAGCCCGAC GTGCTGCAGA TCGAGGGCCT GACCGCCGAA CACATCGGCA CCGTCGCCTG GCAGCACCGG GTACCCATTT TCGAATTGAC CGTGCAACAG GCCTCCCTAG AGGAAGCATT CATGACCCTG ACCAGCGACT CCGTCGAGTA CCGCTCCACC GACACCACCG GCTCCCCAAC CATCGCGGCG GTGGCGGCAT GA
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Protein sequence | MIEVENLSKR YGTKLAVDGL SFVVQPGIVT GFLGPNGAGK STTMRMIAGL DQPTTGRVTV NGGDYRSAAA PMAELGVLLE AKAVHTGRSA RNHLLALAQT NGISRRRVDE VIDIVGLQQV AGKRVGGFSL GMGQRLGVAS ALLGNPQTVL LDEPVNGLDP EGVLWMRTML KDLAADGHTV FVSSHLMSEM AQTASRLVVV GRGKLIADTT VEEFIAQASH HAVTVRTPET TRLRELLLGP DVTITTAQPD VLQIEGLTAE HIGTVAWQHR VPIFELTVQQ ASLEEAFMTL TSDSVEYRST DTTGSPTIAA VAA
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