Gene Namu_3716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3716 
Symbol 
ID8449335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4079012 
End bp4079953 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content67% 
IMG OID645042773 
ProductABC transporter related 
Protein accessionYP_003203009 
Protein GI258653853 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0016772 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.328535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAG TGGAAAATCT CAGCAAGCGA TATGGGACCA AGCTCGCGGT GGACGGACTG 
AGTTTCGTGG TCCAACCGGG AATTGTCACC GGGTTCCTCG GCCCGAACGG CGCCGGGAAG
TCCACCACGA TGCGGATGAT CGCCGGCCTG GACCAACCGA CCACCGGACG GGTCACCGTC
AATGGTGGTG ACTACCGGTC CGCGGCTGCT CCGATGGCCG AACTCGGGGT GCTGCTCGAA
GCCAAGGCGG TGCACACCGG CCGGTCGGCC CGCAACCACC TCCTCGCGTT GGCCCAGACG
AACGGCATCA GCCGGCGCCG GGTGGACGAG GTGATCGACA TCGTCGGCCT GCAGCAGGTC
GCCGGCAAAC GGGTCGGCGG GTTCTCCCTC GGCATGGGCC AACGGCTGGG GGTGGCCTCG
GCATTGCTCG GCAACCCGCA GACCGTGCTC TTGGACGAAC CGGTCAACGG CCTGGACCCC
GAAGGGGTGC TCTGGATGCG CACCATGCTC AAAGACCTCG CCGCCGACGG GCACACCGTC
TTCGTCTCCT CCCACCTGAT GAGCGAAATG GCCCAAACCG CATCCCGTCT GGTGGTCGTC
GGCCGCGGCA AGCTGATCGC CGACACCACC GTCGAGGAGT TCATCGCCCA GGCATCACAC
CACGCCGTCA CCGTCCGCAC CCCCGAAACC ACCCGGCTGC GGGAGCTGCT CCTCGGCCCG
GACGTCACCA TCACCACCGC GCAGCCCGAC GTGCTGCAGA TCGAGGGCCT GACCGCCGAA
CACATCGGCA CCGTCGCCTG GCAGCACCGG GTACCCATTT TCGAATTGAC CGTGCAACAG
GCCTCCCTAG AGGAAGCATT CATGACCCTG ACCAGCGACT CCGTCGAGTA CCGCTCCACC
GACACCACCG GCTCCCCAAC CATCGCGGCG GTGGCGGCAT GA
 
Protein sequence
MIEVENLSKR YGTKLAVDGL SFVVQPGIVT GFLGPNGAGK STTMRMIAGL DQPTTGRVTV 
NGGDYRSAAA PMAELGVLLE AKAVHTGRSA RNHLLALAQT NGISRRRVDE VIDIVGLQQV
AGKRVGGFSL GMGQRLGVAS ALLGNPQTVL LDEPVNGLDP EGVLWMRTML KDLAADGHTV
FVSSHLMSEM AQTASRLVVV GRGKLIADTT VEEFIAQASH HAVTVRTPET TRLRELLLGP
DVTITTAQPD VLQIEGLTAE HIGTVAWQHR VPIFELTVQQ ASLEEAFMTL TSDSVEYRST
DTTGSPTIAA VAA