| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3706 |
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| Symbol | |
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| ID | 8449325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 4069238 |
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| End bp | 4070242 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645042764 |
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| Product | integrase family protein |
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| Protein accession | YP_003203000 |
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| Protein GI | 258653844 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.000354013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.710204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTCG TGCCCTGTTT GCAGCGCCCG GCCGGGGAGG TGCCGCGGCT CGGGGAGGTG
CTGTTGGACG AGTACCTGCG GTTCGTCGCG GCGCGGTGTC GGCCGAATAC GCTGCTGGCT
CAGATGTTCG ACCTGAAGGT GTTCTTCACG GTCGTGGGGC GGCCGCCGGT GGAGGTGACC
ACGGCCGACG TCCTTCGCTT CATCGAGCGG CAGCGGGCAG CCCGTAACGG CAACGTGGTC
CGGCTCGCCG ATGGCGAGTC GGGGTTGGCG TTGACGACGA TCAAGCGGCG TCTCGCGACG
GTCTCCGGCC TGTTCGAGTA TCTGGCCATT CGCGGGTTGG TGGCACGGAA CCCGGTGCCG
CGCAGTCTGT CTGCTCGGCC GGGCCGGGCA CCTGTGCGAG GTGCTCCGTT GATCCGGGCG
CCGCGCCGGC TGCCGCGGAT CCTGAGCCCG GCCGAGGTGA ACGCGCTGAT CAGCGCGCTG
CGGACGGCCC GGGACCGGGC CATGGTGTGG CTGATGCTGC TCGGCGGCCT TCGCCGCTGC
GAGGTCCTGG GCCTGCGGCA TCGTGACGTC CAACCGGGCG AGCGGCGAGT GTTCGTCACC
GGCAAGGGCG GCCACGAGCG GGTCGTGCCG GTCGGGAAGG TGTTCTTCGC CGAGCTGGCC
GGCTATTACG CCACGGAGCG ACCAGACACC GACACCGATC AGGTGTTCGT TGTGTTGAAG
GGACAACGCC GAGGCCAGCC GCTGTCCGCG GCCGGGGTGG ACGAGGTGCT CTCCGGCGCC
CGCCGGCGGG CCGGGCTCGC CCACGCCACC TGCCATGAGT TGCGCCATAC CTGCTTCACC
CGGCTCCGCG AATCCGGGAT GGCGTTGGAG GCGATCCAGG CCCAGGCTGG GCACGTCTCG
ATCGAGACCA CCAAGATCTA CCTGCATCTG GCCCCGGACT GGCTGGTCGA CGAGTACCGA
AAGGCGATGG ACATCCTCGA CGACATCGCG GGAGCTCAAG GATGA
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| Protein sequence | MEFVPCLQRP AGEVPRLGEV LLDEYLRFVA ARCRPNTLLA QMFDLKVFFT VVGRPPVEVT
TADVLRFIER QRAARNGNVV RLADGESGLA LTTIKRRLAT VSGLFEYLAI RGLVARNPVP
RSLSARPGRA PVRGAPLIRA PRRLPRILSP AEVNALISAL RTARDRAMVW LMLLGGLRRC
EVLGLRHRDV QPGERRVFVT GKGGHERVVP VGKVFFAELA GYYATERPDT DTDQVFVVLK
GQRRGQPLSA AGVDEVLSGA RRRAGLAHAT CHELRHTCFT RLRESGMALE AIQAQAGHVS
IETTKIYLHL APDWLVDEYR KAMDILDDIA GAQG
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