Gene Namu_3682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3682 
Symbol 
ID8449301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4039696 
End bp4040850 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content70% 
IMG OID645042746 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_003202982 
Protein GI258653826 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.137461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0394567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCATCA CCGGAGCATC GATCGACGCG GTCACCGTCG CGGTGTACCG GTTCCCCACC 
GACCGCCCGG AGGCCGACGG CACCCTCACC TGGAACGCCA CCACCGCGGT CACCGCCACC
GTGCACGCCG GGAACCGGCA GGGCCTGGGC TGGACCTACA GCACCGCCGC GGCCGCGCAG
GTGGTGACCG ACCACCTTGC CCAGGCGATC ACCGGGCGGG ACGTCATGGA CACCCCCGGG
GCCTGGTCGG CGATGCACCG AGCCTGCCGC AACCTGGGCA CCCGCGGACT GGTCATGCAG
GCCATCAGCG CCGTCGATAT CGCGCTCTGG GACCTCAAAG CACGCGTGCT CGGCATTCCC
CTCACCGACC TGTTCGGGCG GGCCCGGGAG ACGGTTCCGG TCTACGGGTC AGGCGGGTTC
ACCACCCTGT CCGACTCGGA GCTCGCCAAA CAGGTCGACG AGTGGGCCGC GGCCGGCTGC
CCGGCCATGA AGATCAAGAT CGGCCAGTCC TGGGGCACCG ATGTCGATCG GGATATTATG
CGTGTCAACA GCTTCCGCGA AATAGCCGGC CCGGCGGTAG ACCTCATGGT CGACGCCAAC
GGCGGCTACA CAACCGGGCA GGCCCGCCGC GTCGGTGCCA CCCTGGAGCG GCTCGGCGTG
GTGTGGTTCG AGGAACCCGT CTCCAGTGAC GACATCACCG GCCTGGGCGT TGTACGCGCG
GCGGTGCGGT GCGACGTGAC GGCCGGCGAA TACGCTGCCG ACCTGTATGA CATCGATCGG
CTGTGCCCGG TGGTTGACTG CCTGCAACTC GACGCCACGC GGTGCGGCGG CTACACCGGC
TGGCTCCGCG GCGCCGCGAT CGCCCAAGCC CACAACCTGC ACGTCTCCGC GCACTGCGCC
CCCGCGCTGC ACGCGCCGGT CGCCGCCGCC GCGCCCAACC TACGGCACGT CGAATTGTTC
ATCGACCACG CCCGCCTCGA ACCCCTCCTT GTCGACGGCA CCCCCACCGT GCGACACGGC
ACACTCCACC CCGATGGGCG CGCCTCGGGG CATGGCATGA CCATCGCGGC CCGGGCAGTT
GACCATCGGC TGGCAGCACC CGAACACGCC GACTTCGACA GCCCAGCCGA ACCACCGATT
GGAGGATCAC CATGA
 
Protein sequence
MSITGASIDA VTVAVYRFPT DRPEADGTLT WNATTAVTAT VHAGNRQGLG WTYSTAAAAQ 
VVTDHLAQAI TGRDVMDTPG AWSAMHRACR NLGTRGLVMQ AISAVDIALW DLKARVLGIP
LTDLFGRARE TVPVYGSGGF TTLSDSELAK QVDEWAAAGC PAMKIKIGQS WGTDVDRDIM
RVNSFREIAG PAVDLMVDAN GGYTTGQARR VGATLERLGV VWFEEPVSSD DITGLGVVRA
AVRCDVTAGE YAADLYDIDR LCPVVDCLQL DATRCGGYTG WLRGAAIAQA HNLHVSAHCA
PALHAPVAAA APNLRHVELF IDHARLEPLL VDGTPTVRHG TLHPDGRASG HGMTIAARAV
DHRLAAPEHA DFDSPAEPPI GGSP