Gene Namu_3678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3678 
Symbol 
ID8449297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4035115 
End bp4036248 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content67% 
IMG OID645042743 
ProductCBS domain containing membrane protein 
Protein accessionYP_003202979 
Protein GI258653823 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0501093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0630387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCAC ATCATTTCGT CGTGCGCTGG CTTGGTTCCT GGCGGCCGCA ATCCCTGCCC 
TACCGCCGAT CGGAGATGAT CCGCGGGACG CTGGGCTCGT TGCTCGGGCT GCTCACAGGC
GGCCTGGCCG GGTGGCTGTT GGACGTGGGT CCCACGGGCC TGCCCGCCCT CGTTGCCCCG
ATGGGGGCCT CCGCGGTGCT GCTGTTCGCC GCACCAGCAA GCCCACTTGC ACAGCCGTGG
CCGATGCTCG GGGGAAACAT CATCTCCACC GTCATCGGGG TGGCGACCGC GCGGCTGATC
GGCAACGGTA CACCCGTCGG AAGCATCACC GCAGCGGCCG TCGCCGTCGC CGCGGCTATC
GCGGTGATGA TGATGCTGCG CTGCCTGCAT CCACCCGGTG GCGCCTGCGC GTTGTTCGCC
GCTGTGGGCA CCGGCGCCGT ACAGGAGCAG GGCTTTCTGT TCGCCGTGTT CCCGATCGCG
GTGAACAGTC TGACCTTGCT GATCATCGCG GCCGCCGTCA ACAACCTGAC CGGGCGGACG
TACCCGCATG TGCCCGCGCC GGTGCCGGAT CCGGCTGGCA CGGGCCAACG TCTTTCGATC
CAGCCCAGCG AGATCACCGC GGCGATTCGC CGGATGGACC AGGGTCTGGA CGTGCTTCCG
CAGGACATCG TGGCACTCGT CCGCGACGTC GAGGACCATG CAATGGACCG GCGGCTGGGC
CGGTTGCGGG TGGAGTCGGT GATGACCCGC GAGGTCAAGA CCGTCCAGCC GACCGAGAAC
ATGTACCGGG TACGAATGAT CATGTCGAAC GACCTGGTCA AGGCGGTCCC CGTCGTCGAC
GAGGACCGTC ACGTGGTCGG CATCACCACC ATCTACGACC TCTTCCGCCT CGATCTGGTC
AACCTCGACC CCGTGAGCAA GTACATGACG TCCCCGGTCC GGACAATCCG GGGTTCAGCG
CCGGTCGCCG AGCTCGTCGC GCTGATGAGC GGGGAAGGAC TGCGCCACAT TCCCGTGGTG
GATGAGGTCG GACGGCTGCA GGGAATCGTG AGCCGCACCG AGCTGATCGC CGTTCTGCAC
CGCGCCTTGG TCGACGCCAC CACCGGGCCG GTCGAACCGG AGGAGAACAC GTGA
 
Protein sequence
MAAHHFVVRW LGSWRPQSLP YRRSEMIRGT LGSLLGLLTG GLAGWLLDVG PTGLPALVAP 
MGASAVLLFA APASPLAQPW PMLGGNIIST VIGVATARLI GNGTPVGSIT AAAVAVAAAI
AVMMMLRCLH PPGGACALFA AVGTGAVQEQ GFLFAVFPIA VNSLTLLIIA AAVNNLTGRT
YPHVPAPVPD PAGTGQRLSI QPSEITAAIR RMDQGLDVLP QDIVALVRDV EDHAMDRRLG
RLRVESVMTR EVKTVQPTEN MYRVRMIMSN DLVKAVPVVD EDRHVVGITT IYDLFRLDLV
NLDPVSKYMT SPVRTIRGSA PVAELVALMS GEGLRHIPVV DEVGRLQGIV SRTELIAVLH
RALVDATTGP VEPEENT