Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3648 |
Symbol | |
ID | 8449267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 4000993 |
End bp | 4001988 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645042713 |
Product | nitroreductase |
Protein accession | YP_003202949 |
Protein GI | 258653793 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00000896643 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.118841 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGACGG CGTTGGGATT GTCGGAATCG GCGACGCGGC GGGTGGTGGC GGCGGCGGGC CAGGCACCGT CGCTGTTCAA CACCCAGCCG TGGCGGTTCC GGCTCGCCCC CGACCGCATC GAGATCCACC CCGACCGGGG TCGCCGGCTG ATCGCCCACG ACCCCGACGA CCGGGAACTA CGGATCGCCT GCGGCGCCGC GCTGTTCAAC CTCCGGTTGG CCCTGCACGC GCACGGCGTG ACCCCGGTGG TGACCATCCA ACCCGGCGAG ACCCCGGACG CCCTGGCCGT CATCCGGCCC GGCCCGGTGA CCGTGCAATC CCGCGACGAC GCCGCCCTGT ACGCGATGAT CGAACGGCGC CGAACCAACC GACAACCCTT CCTGGACGCT CCGATGCCGG AAGCGTATCG GCGGGTGCTG ACCTATGCGG CGGCCGTCGA AGGCGCGGAC TTTCGGACGA TGGTCACGCC GGCGGAGCGG TTCGAGCTGC GGTGCCTGGT CGCGGCCGCC GACCAGCGGC AACGTGACGA CGTGGTCTGC CGGGCCGAAC TGGAGGCCTG GGCCGGTGAT CGGCATGGCC ACCCGGACGG GGTGCCGTTG GCCGCGGCCG GGCCGAGACC TGAATCCCAC GACCTCTGGG CGTATCGGGA TTTGGGCAAC GGCTACGCCC ATGTCCGGCC CCCGGACGGG GACTTCGAGG CGGAACCGTT CGTGGTGGTG CTGTCCACCT GGATGGATGG ACCGGCCTGC CAGGTCGAGG CCGGTCAGGC CCTGCAACGG GTGTTGTTGA CCGCGACTGC ACTGGGGCTG AGCGCGTCCT TCCTGTCCCA GCCCATCGAG GTCGCCGAGC AGCGACGGCG TTTGCGTCGG CTGCTGGGCG ACGGCCGGTA CCCGCAGGCG GTGCTGCGCC TGGGCTTCGG GGCGCCGGTG GCGAAAACCC CGCGGCGGGA CGCGACGGAC CTGCTGCTGC CGGAACCGGT CGGTGCCGCC CCCTGA
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Protein sequence | MRTALGLSES ATRRVVAAAG QAPSLFNTQP WRFRLAPDRI EIHPDRGRRL IAHDPDDREL RIACGAALFN LRLALHAHGV TPVVTIQPGE TPDALAVIRP GPVTVQSRDD AALYAMIERR RTNRQPFLDA PMPEAYRRVL TYAAAVEGAD FRTMVTPAER FELRCLVAAA DQRQRDDVVC RAELEAWAGD RHGHPDGVPL AAAGPRPESH DLWAYRDLGN GYAHVRPPDG DFEAEPFVVV LSTWMDGPAC QVEAGQALQR VLLTATALGL SASFLSQPIE VAEQRRRLRR LLGDGRYPQA VLRLGFGAPV AKTPRRDATD LLLPEPVGAA P
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