Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3561 |
Symbol | |
ID | 8449180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3913009 |
End bp | 3913647 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645042636 |
Product | protein of unknown function DUF162 |
Protein accession | YP_003202872 |
Protein GI | 258653716 |
COG category | [S] Function unknown |
COG ID | [COG1556] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0438326 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0115324 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCC GTGACGCCGT GCTGAACCGC ATCCGCGCCG CCCTGGCCGC CGATACGGCC CCGCCACCGC CGATCCCCCG CGACTACATC CGCGTCGGCG ACAACCCGCC CGGCAGCCCG CCCGTGCTCG AACTCATGGT CGACCGGCTC ATCGACTACA AGGCCGTGGT CCGCGAAGTC ACCCCCGACC AACTCGCGGA CGCCATCGAC GATGCCCTGA CCGGCTCGCG TTCGGTGGTC ATCGCTCAGG ACCTGGACCC GGACCTGGCC GCTGCTGCCG CCCGCTCGAA CCGGACCGTC ACCATCGACG GCAACCCCGC CGTGCTGACC CCCGCCGAAC TCGACTCGAT CGACGCGGTC ATCACCACCG CCAAGGTCGG CATCGCCCTG TCCGGCACCA TCACCCTGGA CGGCGGCCCC GGCCAAGGAC GCCGCGCCAT CACCCTGGTC CCGGACTTCC ACCTGATCGT GCTGCACGCG GACCAGATCG TGCAGACCGT CCCCGAGGCC ATCGCCCGGC TCGACCCTCT CCGGCCGCTG ACCATGATCG CCGGGCCGTC CGCGACCAGC GACATCGAAC TGGAACGCGT CGAGGGGGTG CACGGACCGC GCACCCTGTA CGTGCTCATC GTCGGCTAG
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Protein sequence | MSSRDAVLNR IRAALAADTA PPPPIPRDYI RVGDNPPGSP PVLELMVDRL IDYKAVVREV TPDQLADAID DALTGSRSVV IAQDLDPDLA AAAARSNRTV TIDGNPAVLT PAELDSIDAV ITTAKVGIAL SGTITLDGGP GQGRRAITLV PDFHLIVLHA DQIVQTVPEA IARLDPLRPL TMIAGPSATS DIELERVEGV HGPRTLYVLI VG
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