Gene Namu_3561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3561 
Symbol 
ID8449180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3913009 
End bp3913647 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content71% 
IMG OID645042636 
Productprotein of unknown function DUF162 
Protein accessionYP_003202872 
Protein GI258653716 
COG category[S] Function unknown 
COG ID[COG1556] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0438326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0115324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCC GTGACGCCGT GCTGAACCGC ATCCGCGCCG CCCTGGCCGC CGATACGGCC 
CCGCCACCGC CGATCCCCCG CGACTACATC CGCGTCGGCG ACAACCCGCC CGGCAGCCCG
CCCGTGCTCG AACTCATGGT CGACCGGCTC ATCGACTACA AGGCCGTGGT CCGCGAAGTC
ACCCCCGACC AACTCGCGGA CGCCATCGAC GATGCCCTGA CCGGCTCGCG TTCGGTGGTC
ATCGCTCAGG ACCTGGACCC GGACCTGGCC GCTGCTGCCG CCCGCTCGAA CCGGACCGTC
ACCATCGACG GCAACCCCGC CGTGCTGACC CCCGCCGAAC TCGACTCGAT CGACGCGGTC
ATCACCACCG CCAAGGTCGG CATCGCCCTG TCCGGCACCA TCACCCTGGA CGGCGGCCCC
GGCCAAGGAC GCCGCGCCAT CACCCTGGTC CCGGACTTCC ACCTGATCGT GCTGCACGCG
GACCAGATCG TGCAGACCGT CCCCGAGGCC ATCGCCCGGC TCGACCCTCT CCGGCCGCTG
ACCATGATCG CCGGGCCGTC CGCGACCAGC GACATCGAAC TGGAACGCGT CGAGGGGGTG
CACGGACCGC GCACCCTGTA CGTGCTCATC GTCGGCTAG
 
Protein sequence
MSSRDAVLNR IRAALAADTA PPPPIPRDYI RVGDNPPGSP PVLELMVDRL IDYKAVVREV 
TPDQLADAID DALTGSRSVV IAQDLDPDLA AAAARSNRTV TIDGNPAVLT PAELDSIDAV
ITTAKVGIAL SGTITLDGGP GQGRRAITLV PDFHLIVLHA DQIVQTVPEA IARLDPLRPL
TMIAGPSATS DIELERVEGV HGPRTLYVLI VG