Gene Namu_3462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3462 
Symbol 
ID8449077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3808373 
End bp3809593 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content70% 
IMG OID645042538 
Productbeta-lactamase 
Protein accessionYP_003202778 
Protein GI258653622 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00219099 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0121501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTACTC AGCTCGACGG CACCAGGATC GACAGCACCA CGATCGACAC CGCTTCGATC 
GACGCAGCTT CGATCGACAA GGTGTTGCAG GACGCGGTCA GTTCCGGCGC GGTGCCGCAC
GTCGCGGCGA TCGCGGCCGA CCGCGACGGC ATCATCTACG AGGGCGGCGC GGGGGTGCGC
ATCGCCGGGG AAAGTCAGGA CCCGGTGACG ACCAGCACCC AGTTCCGGCT GATGTCGATG
ACCAAGATGG TCTGCACGAC GGTCGCTCTG CAGCAGCTGG AACGGGGCGA GCTGGACCTG
GACGCACCGG TGGACAGCTA CGTGCCGGCG TTCGCCGACG TGGCCGTGCT CGAAGGGTTC
GACGGCGAGA CCCCGCGGCT GCGGCCGCCG GCCAGCCGGG CGACCGTGCG GCAGTTGCTC
ACCCACACCA CCGGGCTGGG CTACTGGTTC TGGAGCCCGG AGCTGCGGGA GTTCGAGCGG
GTGACCGGGG TGCCCAACGT GGTGCCCGGG TCGGCGGAGG CGTTCCAGGC GCCGATGCTG
TTCGACCCGG GGGCCCGGTT CAACTACGGC ATCAACACCG ACTGGCTGGG CCGGGTGGTG
GAGGCGATCG CCGGCACCAC CCTGGACGTG GTGATCCGGG ACGGGGTGAC CGGGCCGCTG
GGCATGGCCG ACACGATGTT CCGGCTCGAC CCGCCGCGGA CCGCGAACTG CGTCACCGTG
CACGTCAAGG GCGAGGACTC GGCCTGGGTG TCGGCCGGCG AGATCCTCAA CCAGGAGCCC
GACTGGTGGG CCGGCGGGCA CGGCCTGTAC TCGACGCCCC GGGACTACAT CCGGTTCGAG
CGGGCGCTGC TGCGCAGCGG CGAGCTGGAC GGGGTGCGCA TCTTGCGGCC GGAGACGGTG
GACGCGGCGT TCACCAACCA GATCGGCGAG CTGGACGTGC CGGCGGACAT CCCCACCGCC
GACCCGCCGA TCAGCGACGA CATCCACTTC GGCCCCGGCT GGAAGTGGGG CTTCGGGTTG
CTGCTGAACA CCGATGACGT CCCCGGCGGC CGCCGAGCTG GCACCGGGGC CTGGGCCGGG
CTGTTCAACA CGCACTTCTT CATCGACCGG ACGACGGGCA TCTGCGCGTC GATCTACACC
AACTCGCTGC CGTTCGCGTC CCGGCACGAG GCGTGGCAGA CCTACGCCGA TTTCGAGGCC
GCCCTGTACG CGGCACTCTG A
 
Protein sequence
MSTQLDGTRI DSTTIDTASI DAASIDKVLQ DAVSSGAVPH VAAIAADRDG IIYEGGAGVR 
IAGESQDPVT TSTQFRLMSM TKMVCTTVAL QQLERGELDL DAPVDSYVPA FADVAVLEGF
DGETPRLRPP ASRATVRQLL THTTGLGYWF WSPELREFER VTGVPNVVPG SAEAFQAPML
FDPGARFNYG INTDWLGRVV EAIAGTTLDV VIRDGVTGPL GMADTMFRLD PPRTANCVTV
HVKGEDSAWV SAGEILNQEP DWWAGGHGLY STPRDYIRFE RALLRSGELD GVRILRPETV
DAAFTNQIGE LDVPADIPTA DPPISDDIHF GPGWKWGFGL LLNTDDVPGG RRAGTGAWAG
LFNTHFFIDR TTGICASIYT NSLPFASRHE AWQTYADFEA ALYAAL