Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3462 |
Symbol | |
ID | 8449077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 3808373 |
End bp | 3809593 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645042538 |
Product | beta-lactamase |
Protein accession | YP_003202778 |
Protein GI | 258653622 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00219099 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0121501 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTACTC AGCTCGACGG CACCAGGATC GACAGCACCA CGATCGACAC CGCTTCGATC GACGCAGCTT CGATCGACAA GGTGTTGCAG GACGCGGTCA GTTCCGGCGC GGTGCCGCAC GTCGCGGCGA TCGCGGCCGA CCGCGACGGC ATCATCTACG AGGGCGGCGC GGGGGTGCGC ATCGCCGGGG AAAGTCAGGA CCCGGTGACG ACCAGCACCC AGTTCCGGCT GATGTCGATG ACCAAGATGG TCTGCACGAC GGTCGCTCTG CAGCAGCTGG AACGGGGCGA GCTGGACCTG GACGCACCGG TGGACAGCTA CGTGCCGGCG TTCGCCGACG TGGCCGTGCT CGAAGGGTTC GACGGCGAGA CCCCGCGGCT GCGGCCGCCG GCCAGCCGGG CGACCGTGCG GCAGTTGCTC ACCCACACCA CCGGGCTGGG CTACTGGTTC TGGAGCCCGG AGCTGCGGGA GTTCGAGCGG GTGACCGGGG TGCCCAACGT GGTGCCCGGG TCGGCGGAGG CGTTCCAGGC GCCGATGCTG TTCGACCCGG GGGCCCGGTT CAACTACGGC ATCAACACCG ACTGGCTGGG CCGGGTGGTG GAGGCGATCG CCGGCACCAC CCTGGACGTG GTGATCCGGG ACGGGGTGAC CGGGCCGCTG GGCATGGCCG ACACGATGTT CCGGCTCGAC CCGCCGCGGA CCGCGAACTG CGTCACCGTG CACGTCAAGG GCGAGGACTC GGCCTGGGTG TCGGCCGGCG AGATCCTCAA CCAGGAGCCC GACTGGTGGG CCGGCGGGCA CGGCCTGTAC TCGACGCCCC GGGACTACAT CCGGTTCGAG CGGGCGCTGC TGCGCAGCGG CGAGCTGGAC GGGGTGCGCA TCTTGCGGCC GGAGACGGTG GACGCGGCGT TCACCAACCA GATCGGCGAG CTGGACGTGC CGGCGGACAT CCCCACCGCC GACCCGCCGA TCAGCGACGA CATCCACTTC GGCCCCGGCT GGAAGTGGGG CTTCGGGTTG CTGCTGAACA CCGATGACGT CCCCGGCGGC CGCCGAGCTG GCACCGGGGC CTGGGCCGGG CTGTTCAACA CGCACTTCTT CATCGACCGG ACGACGGGCA TCTGCGCGTC GATCTACACC AACTCGCTGC CGTTCGCGTC CCGGCACGAG GCGTGGCAGA CCTACGCCGA TTTCGAGGCC GCCCTGTACG CGGCACTCTG A
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Protein sequence | MSTQLDGTRI DSTTIDTASI DAASIDKVLQ DAVSSGAVPH VAAIAADRDG IIYEGGAGVR IAGESQDPVT TSTQFRLMSM TKMVCTTVAL QQLERGELDL DAPVDSYVPA FADVAVLEGF DGETPRLRPP ASRATVRQLL THTTGLGYWF WSPELREFER VTGVPNVVPG SAEAFQAPML FDPGARFNYG INTDWLGRVV EAIAGTTLDV VIRDGVTGPL GMADTMFRLD PPRTANCVTV HVKGEDSAWV SAGEILNQEP DWWAGGHGLY STPRDYIRFE RALLRSGELD GVRILRPETV DAAFTNQIGE LDVPADIPTA DPPISDDIHF GPGWKWGFGL LLNTDDVPGG RRAGTGAWAG LFNTHFFIDR TTGICASIYT NSLPFASRHE AWQTYADFEA ALYAAL
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