Gene Namu_3458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3458 
Symbol 
ID8449073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3801334 
End bp3802092 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content72% 
IMG OID645042534 
ProductHAD-superfamily hydrolase, subfamily IA, variant 1 
Protein accessionYP_003202774 
Protein GI258653618 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00396228 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00386241 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGCTGCGT CACAGCCGCG GCGGCGCGAG CACGAGGGAT GCGCGCGCCC CGGTTACCGT 
CGGCGGGTGA ACGCGATCCT GTTCGACCTC GACGGCACCA TCACCGACTC CGCGCCCGGC
ATCATCGACT GCTTCCAGCA TGCGCTGGCC GCGGTGGGCT TCCCGCCGGC GGACCAGGAT
GTGCTGCGCG GGGTGGTCGG CCCGCCGATC GTGCACACCT TCGAGCGGCT GGGGATGGAC
CAGGAACAGA TCCGGACCGC GCGGGCCGCG TACCGGGCCC GCTACGACGA GCGGGGTTGG
GCCGAGAATT CCGTCTTCCC GGGGATGGCC GAGCTGCTGG AACGCCTGGG CCGCAGCGGG
ATCCCGCTGG GCGTGGCGAC CTCGAAGAAC GAGCGGATGG CCCGGCACAT CCTGCGTCAT
TTCGGGCTGG CCGAGCCGTT CGCGTTCATC GGCGGGGCCA GCGACGACGA CACCCGGATC
GAAAAGGCCG ACGTCATCGT GCACAGCCTG GGTGGACTGG GCCTGCCGGT GCACCGGGCC
GAGGACGGCG GCACCCTGGG CGTGCTGCTG GTCGGCGACC GCAAGCACGA CGTCGAGGGG
GCGGCCCGGT ACGGCATCCC GACCGTCCTG GTCAGCTGGG GCTACGGCAC CCCGCAGGAG
CGGGCCGGCG CCCGCTGGAG CGTGGACACC CCGGCCGAGC TGGGGGAGTT GCTGGATCAA
CTGGTCGGCG ATGTCGTCAC CGGCGGTGCC CAGCACTGA
 
Protein sequence
MAASQPRRRE HEGCARPGYR RRVNAILFDL DGTITDSAPG IIDCFQHALA AVGFPPADQD 
VLRGVVGPPI VHTFERLGMD QEQIRTARAA YRARYDERGW AENSVFPGMA ELLERLGRSG
IPLGVATSKN ERMARHILRH FGLAEPFAFI GGASDDDTRI EKADVIVHSL GGLGLPVHRA
EDGGTLGVLL VGDRKHDVEG AARYGIPTVL VSWGYGTPQE RAGARWSVDT PAELGELLDQ
LVGDVVTGGA QH